DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt15

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_038950834.1 Gene:Galnt15 / 100360475 RGDID:2322081 Length:674 Species:Rattus norvegicus


Alignment Length:590 Identity:184/590 - (31%)
Similarity:268/590 - (45%) Gaps:118/590 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GPRHCSFYIIAFLICQLFFLVIFIRNDDASSANELLSFMNESEESDHLDWRVFISHTPETSEDFY 73
            |.||.|:.:|..:          .|..|              ||:...|||     |.|..|:..
  Rat   146 GRRHGSYQLIKHM----------SRRPD--------------EEASERDWR-----TEEDGEESE 181

  Fly    74 Q------------YNIHLSNALGLIRKLPVTRHHSCTTRN--SILPAPLEANVSVVISFHNEARS 124
            :            .|..||..|.|.|.||..||..|..::  |.||     ..||::.||:||..
  Rat   182 EEALTPLGLDPDGLNKPLSARLPLRRVLPEARHPLCLQQHPPSGLP-----TASVILGFHDEAWP 241

  Fly   125 MLLRTIVSLLSRSPEDYLHELILVDDGSQRD---------VTLLDDLKRWMGGVFGSRYRLGLTF 180
            .||||:.|:|..:|...|.|:|||||.||::         |..|:.:|                .
  Rat   242 TLLRTVHSILDTAPRALLQEIILVDDLSQQEPLKSALSEYVAKLEAVK----------------L 290

  Fly   181 LRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTT 245
            ||:.:|:|.|.:|..||:.|:|..::|:|:|||.:.|||||||.|:|.:.:..|||::|.||..|
  Rat   291 LRSNKRLGTIGARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKT 355

  Fly   246 LSYRKGNELLKGGFDWSLHFHWLKRQLTNQE-----SLEMPYQSPAFAGGVLMMSREWFLKLGSF 305
            |.| ..::|.:|..||.|.|.|  ..|..||     |...|.:||.....|:.:.|.:|...|::
  Rat   356 LQY-SASKLQRGVLDWKLDFQW--EPLREQELKALPSPISPVRSPVVPQEVVAVDRHYFQNTGAY 417

  Fly   306 NPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSK 370
            :|.|.:||.|::|::.|.|||||.:||:||||:||:::         ..|..|....|..|.|..
  Rat   418 DPLLSLWGSENLEMSFKAWLCGGSVEILPCSRVGHLYQ---------SQDASLRTDPEVILKNKI 473

  Fly   371 IIAESWLDEYKNMFYALRPAARRIPLDHTYDELQRMRKERR--CHPFEWYLRHVSPEL-----RM 428
            .|||:||..:|..||...|.|..:......|..:|::.:||  |..|.|:|.:|.|||     |.
  Rat   474 RIAETWLSSFKETFYRHIPEAFALSKVAKPDCTERLKLQRRLGCRTFHWFLANVYPELYPSEHRP 538

  Fly   429 HFD-ELSATGTLRNEDRCVHARQKDSQ---PI-LASCYLSDITQWSMLRQSGQ----LSTHRELC 484
            .|. :|.:||.    ..|...|.:...   |: ||.|  |:..|...|..:.:    ..:.:.||
  Rat   539 RFSGKLHSTGL----GLCADCRAEGDLLGCPMTLAPC--SNNRQQQNLEHTSRKEILFGSPQRLC 597

  Fly   485 LAVGFGMRIALEPCGRNETVRRSQRW-VRLGTHLLHAESHLCLD---NPLKDRLEMSTCRSHAVS 545
            ..|. |.|:.|:.|.........|.| .:....::|..|..|::   .|....|.:..| ....|
  Rat   598 FDVR-GERVILQNCTEEGPAIHQQHWDFQEDGLIIHVLSGKCMEAGVRPSSKDLYLRQC-DGKTS 660

  Fly   546 QSFQF 550
            |.::|
  Rat   661 QLWRF 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 119/324 (37%)
Ricin_B_lectin 435..548 CDD:279046 28/124 (23%)
Galnt15XP_038950834.1 pp-GalNAc-T 230..528 CDD:133004 119/325 (37%)
Ricin_B_lectin 540..663 CDD:395527 30/130 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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