DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and galnt3

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_021334717.1 Gene:galnt3 / 100331984 ZFINID:ZDB-GENE-120313-1 Length:625 Species:Danio rerio


Alignment Length:497 Identity:174/497 - (35%)
Similarity:260/497 - (52%) Gaps:58/497 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ETSEDFYQYNIHLSNALGLIRKL-PVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTI 130
            |..|:.:.:|::.|:.:.|.|.| |.||...|..:......|| ...||:|.|||||.|.||||:
Zfish   136 ERGEEKHCFNLYASDRISLSRDLGPDTRPPECIEQTFRRCPPL-PTTSVIIVFHNEAWSTLLRTV 199

  Fly   131 VSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNR 195
            .|:|..||..:|.|:|||||.|. |..|.|.|..::..:...|      .:|..||.|||.:|..
Zfish   200 YSVLHTSPALFLKEIILVDDASV-DEHLKDKLDEFLKQLHIVR------VVRQHERKGLITARLL 257

  Fly   196 GASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRK----GNELLK 256
            |||:|:|..:.|||:|||...|||||||.|:|.|::..|||.:..||..|..:.|    |....:
Zfish   258 GASVATGDTLTFLDAHCECFHGWLEPLLARIAENSSAVVSPDITTIDLNTFEFMKPSPYGQHHNR 322

  Fly   257 GGFDWSLHFHW-----LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGES 316
            |.|||.|.|.|     .:|:....|:  .|.::|.||||:..:||::|..:||::..::|||||:
Zfish   323 GNFDWGLSFGWETLPDHERRRRKDET--YPIKTPTFAGGLFSISRDYFYHIGSYDEEMEIWGGEN 385

  Fly   317 IELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYK 381
            ||::.::|.||||:||:|||.:||:||.:....||        ...:....|...:||.|:|:||
Zfish   386 IEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFP--------KGTQVIARNQVRLAEVWMDDYK 442

  Fly   382 NMFYALRPAARRIPLDHTYDELQR---MRKERRCHPFEWYLRHVSPELRMHFDELSATGTLRN-- 441
            .:||.....|.:|..:|::.::.|   :|:..:|..|.|||::|.||:.|........|.:||  
Zfish   443 EIFYRRNQQAAQIAKEHSFGDVSRRVDLRERLQCKSFSWYLKNVYPEVFMPDLNPLQFGAIRNMG 507

  Fly   442 EDRCVHARQKD--SQP-ILASCYLSDITQWSMLRQSGQLSTH--------RELCLAVGFGMRIAL 495
            ::.|:...:.:  .:| |:..|:.....|:.      :.|||        :||||....|..:.|
Zfish   508 KEACLDVGESNEGGKPLIMYPCHGMGGNQYF------EYSTHHEIRHNIQKELCLDGTDGAMVRL 566

  Fly   496 EPC---GRNETVRRSQRW-VRLGTHLLHAESHLCL----DNP 529
            |.|   |.|......|:| :|......:..|..||    :||
Zfish   567 EECQYKGHNTITSPQQKWELREDQLFYNKASKQCLSARPENP 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 128/320 (40%)
Ricin_B_lectin 435..548 CDD:279046 29/116 (25%)
galnt3XP_021334717.1 pp-GalNAc-T 182..487 CDD:133004 128/321 (40%)
Ricin_B_lectin 500..622 CDD:306998 29/115 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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