DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and galr2b

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001410737.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:302 Identity:98/302 - (32%)
Similarity:168/302 - (55%) Gaps:29/302 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNM-RSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            ||...|.:|.:.|..||.||:.|::.:..: .:||||.|:||:.||..|:|.|:||.||.|.:..
Zfish    28 IVSVVFSLIFLLGTIGNSLVLAVLLRSGQVGYNTTNLFILNLSVADFFFIIFCVPFQATIYSLEG 92

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |.:|.|.|:.|.:.|.:|.:||.:||..:|:||:||:.:|:|||.:||....::|:|.:|.:.||
Zfish    93 WVFGSFMCKVVHFFINLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTPCNAVVAMVVIWGLSLV 157

  Fly   169 VSVPVAFTHDVVVDYDAKKNITYG----------MCTFTTNDFLGPRTYQVTFFISSYLLPLMII 223
            .:.|....:| ::|::.......|          .||                |:..|::|::|:
Zfish   158 FAGPYLSYYD-LIDFENSNVCVPGWEEHNRKVLDTCT----------------FVFGYVIPVLIV 205

  Fly   224 SGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNT 288
            |..|.|.|..||.....:....||:|.:::||:::::|.:.|...|||..:::|.........|.
Zfish   206 SLSYTRTIKYLWTAVDPLDGMSESKRAKRKVTKMIIIVTVLFCICWLPYHVVILCYLYGDFPFNQ 270

  Fly   289 LTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNC 330
             |....::.:..:||::||:||::||.:|::|||.|.|..:|
Zfish   271 -TTYAFRLLSHCMAYANSCLNPIVYALVSKHFRKGFKKVFSC 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 95/294 (32%)
TM helix 1 40..66 CDD:320224 10/25 (40%)
TM helix 2 73..99 CDD:320224 15/25 (60%)
TM helix 3 111..141 CDD:320224 13/29 (45%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
galr2bNP_001410737.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 95/294 (32%)
TM helix 1 28..54 CDD:320225 10/25 (40%)
TM helix 2 62..88 CDD:320225 15/25 (60%)
TM helix 3 100..130 CDD:320225 13/29 (45%)
TM helix 4 142..162 CDD:320225 5/19 (26%)
TM helix 5 186..215 CDD:320225 10/44 (23%)
TM helix 6 231..261 CDD:320225 9/29 (31%)
TM helix 7 273..298 CDD:320225 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..362
Blue background indicates that the domain is not in the aligned region.

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