DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and galr2b

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_001339169.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:302 Identity:98/302 - (32%)
Similarity:168/302 - (55%) Gaps:29/302 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNM-RSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            ||...|.:|.:.|..||.||:.|::.:..: .:||||.|:||:.||..|:|.|:||.||.|.:..
Zfish    28 IVSVVFSLIFLLGTIGNSLVLAVLLRSGQVGYNTTNLFILNLSVADFFFIIFCVPFQATIYSLEG 92

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |.:|.|.|:.|.:.|.:|.:||.:||..:|:||:||:.:|:|||.:||....::|:|.:|.:.||
Zfish    93 WVFGSFMCKVVHFFINLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTPCNAVVAMVVIWGLSLV 157

  Fly   169 VSVPVAFTHDVVVDYDAKKNITYG----------MCTFTTNDFLGPRTYQVTFFISSYLLPLMII 223
            .:.|....:| ::|::.......|          .||                |:..|::|::|:
Zfish   158 FAGPYLSYYD-LIDFENSNVCVPGWEEHNRKVLDTCT----------------FVFGYVIPVLIV 205

  Fly   224 SGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNT 288
            |..|.|.|..||.....:....||:|.:::||:::::|.:.|...|||..:::|.........|.
Zfish   206 SLSYTRTIKYLWTAVDPLDGMSESKRAKRKVTKMIIIVTVLFCICWLPYHVVILCYLYGDFPFNQ 270

  Fly   289 LTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNC 330
             |....::.:..:||::||:||::||.:|::|||.|.|..:|
Zfish   271 -TTYAFRLLSHCMAYANSCLNPIVYALVSKHFRKGFKKVFSC 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 48/117 (41%)
7tm_1 55..313 CDD:278431 84/268 (31%)
galr2bXP_001339169.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 95/294 (32%)
TM helix 1 29..53 CDD:320225 9/23 (39%)
TM helix 2 63..85 CDD:320225 12/21 (57%)
TM helix 3 101..123 CDD:320225 7/21 (33%)
TM helix 4 146..162 CDD:320225 5/15 (33%)
TM helix 5 187..210 CDD:320225 7/38 (18%)
TM helix 6 237..259 CDD:320225 6/21 (29%)
TM helix 7 273..298 CDD:320225 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3501
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 1 1.000 - - FOG0000972
OrthoInspector 1 1.000 - - mtm6485
orthoMCL 1 0.900 - - OOG6_105726
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1132
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.870

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