DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and prlh2r

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001108619.1 Gene:prlh2r / 797157 ZFINID:ZDB-GENE-120411-41 Length:371 Species:Danio rerio


Alignment Length:364 Identity:111/364 - (30%)
Similarity:179/364 - (49%) Gaps:50/364 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTT 73
            ||||:.:      :|.||..:.|.  ...|..:. .:.::.:....||||:::::..|..:.|||
Zfish    14 NISLDLS------SSSFTGLQLLM--DLKPLFIP-LYTMLVLIACSGNLLLLILIGLNKKLHSTT 69

  Fly    74 NLMIVNLAAADLMFVILCIPFTATDYMVYY------WPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            |.:|.|||..||:..:.|:|.||     :|      |.:|:|.|..|..:...|.||::.:|..:
Zfish    70 NFLIGNLALVDLVMCLFCVPLTA-----FYAFDERGWVFGQFMCHFVTLMQTATVFAAVLSLTAI 129

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMC-TF 196
            ::||::.|.:|||.|..|.....|  :|::|:..|.:|.|.|. |.|.:|. ::......:| .|
Zfish   130 AVDRYVVVAYPIRRRGGRWFCGWL--VVSIWLCALAMSTPTAL-HTVYLDL-SETGHEMAVCEEF 190

  Fly   197 TTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRM----SKESQRGRKR--VT 255
            .....|....|...|.:.||.:||..:|..|..:...|..:.|...|    |.:.:.||||  ..
Zfish   191 WHGQELSRLIYSCFFLLLSYFVPLAAVSISYCAISCHLQHRATPRLMAATPSNQEKWGRKRRKTF 255

  Fly   256 RLVVVVVIAFASLWLPVQLILLLKSLD----VIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFL 316
            ||::|.|::||..|||:|::.|::.||    ::..|.:.  ||||:...||.||:|.||.:||.|
Zfish   256 RLLLVSVLSFAFSWLPLQIVNLIRDLDTDFAILSKNHVN--VIQVSCHLLAMSSACYNPFIYASL 318

  Fly   317 SENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCARTSTT 355
            .:.|....     |.:.:|.        ||..|.::|.|
Zfish   319 HKKFLSYL-----CHNMFQK--------RKAHCTQSSIT 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 95/301 (32%)
TM helix 1 40..66 CDD:320224 4/25 (16%)
TM helix 2 73..99 CDD:320224 12/25 (48%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 15/31 (48%)
TM helix 7 292..317 CDD:320224 13/24 (54%)
prlh2rNP_001108619.1 7tmA_PrRP_R 35..326 CDD:320516 96/302 (32%)
TM helix 1 36..62 CDD:320516 4/26 (15%)
TM helix 2 69..94 CDD:320516 12/29 (41%)
TM helix 3 108..138 CDD:320516 8/29 (28%)
TM helix 4 149..170 CDD:320516 6/22 (27%)
TM helix 5 198..227 CDD:320516 8/28 (29%)
TM helix 6 249..279 CDD:320516 14/29 (48%)
TM helix 7 294..319 CDD:320516 13/26 (50%)

Return to query results.
Submit another query.