DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and prlhr2b

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001108618.2 Gene:prlhr2b / 792590 ZFINID:ZDB-GENE-091117-9 Length:354 Species:Danio rerio


Alignment Length:298 Identity:99/298 - (33%)
Similarity:158/298 - (53%) Gaps:22/298 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFT-ATDYMVYYWPYGRFW 110
            ::.:.|.|||.|:|.|:.....|.:.||..|.|||.:|::..:.|:||| |..:..:.|.:|||.
Zfish    53 LVVLVGVFGNYLLIYVICRTRKMHNVTNFFIGNLAFSDMLMCVTCVPFTLAYAFSAHGWTFGRFM 117

  Fly   111 CRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVT--LWIVVLVVSVPV 173
            |..|..:..||.:.|::||..:::||:.|.|||::.|:    ::...|.|.  :|::..|:..| 
Zfish   118 CYLVFLIQPVTVYVSVFTLTAIAVDRYYATVHPLKKRI----SMAACAYVLSGIWLLSCVLVAP- 177

  Fly   174 AFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFIS----SYLLPLMIISGLYMRMIMRL 234
            |..|...|::..:     |: |.....:||..|.::.:..|    :|:|||..:...|:.:.::|
Zfish   178 AVAHTYHVEFRDE-----GL-TICEEFWLGQETQRLVYAYSTLLLTYILPLSAVCVSYLCISVKL 236

  Fly   235 WR---QGTGVRMSKESQRGRKR-VTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQ 295
            ..   .|...|...|:||.||| :.|||.:||.|||..|||:.:..:|:.:|:...|....|:||
Zfish   237 RNCVAPGHRTRDQAEAQRIRKRKIFRLVSLVVAAFAVCWLPIHVFNVLRDIDIRLINKRHFLLIQ 301

  Fly   296 VTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSR 333
            :.....|.||||.||.|||:|.:.||....|...|..|
Zfish   302 LLCHLCAMSSSCCNPFLYAWLHDRFRAELRKMFTCHRR 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 96/287 (33%)
TM helix 1 40..66 CDD:320224 7/18 (39%)
TM helix 2 73..99 CDD:320224 12/26 (46%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 4/21 (19%)
TM helix 5 204..233 CDD:320224 7/32 (22%)
TM helix 6 249..279 CDD:320224 15/30 (50%)
TM helix 7 292..317 CDD:320224 13/24 (54%)
prlhr2bNP_001108618.2 None

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