DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Kiss1r

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_076482.2 Gene:Kiss1r / 78976 RGDID:70930 Length:396 Species:Rattus norvegicus


Alignment Length:345 Identity:107/345 - (31%)
Similarity:171/345 - (49%) Gaps:36/345 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GTLP-----WIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPF 94
            |:.|     |:|..||..:.:.|..||.|||.|:..:.:|::.||..|.||||.|:.|::.|:||
  Rat    34 GSAPRPLDAWLVPLFFAALMLLGLVGNSLVIFVICRHKHMQTVTNFYIANLAATDVTFLLCCVPF 98

  Fly    95 TATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAI 159
            ||..|.:..|..|.|.|:.|.|:..|:..|:..||..||:||:...|.|:|:...||..:.|...
  Rat    99 TALLYPLPTWVLGDFMCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALTVS 163

  Fly   160 VTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLG---PRTYQVTFFISSYLLPLM 221
            :::|:....||.||...|          .::.|..|:.:..|..   .|.:.:...::.|||||:
  Rat   164 LSIWVGSAAVSAPVLALH----------RLSPGPHTYCSEAFPSRALERAFALYNLLALYLLPLL 218

  Fly   222 IISGLYMRMIMRLWRQGT----------GVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLIL 276
            .....|..|:..|.|...          |..:::.:...|.:|:|||..||:.||:.|.|:||.|
  Rat   219 ATCACYGAMLRHLGRAAVRPAPTDGALQGQLLAQRAGAVRTKVSRLVAAVVLLFAACWGPIQLFL 283

  Fly   277 LLKSL---DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQ--- 335
            :|::|   ......:.....:::.|..::||:|.:||||||||..:||:||.:...|..:.|   
  Rat   284 VLQALGPSGAWHPRSYAAYALKIWAHCMSYSNSALNPLLYAFLGSHFRQAFCRVCPCGPQRQRRP 348

  Fly   336 --NYTSDLPPPRKTSCARTS 353
              :..||...|.....:|.:
  Rat   349 HASAHSDRAAPHSVPHSRAA 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 43/116 (37%)
7tm_1 55..313 CDD:278431 85/273 (31%)
Kiss1rNP_076482.2 7tmA_KiSS1R 43..334 CDD:320223 97/300 (32%)
TM helix 1 45..69 CDD:320223 10/23 (43%)
TM helix 2 78..100 CDD:320223 11/21 (52%)
TM helix 3 116..138 CDD:320223 7/21 (33%)
TM helix 4 161..177 CDD:320223 3/15 (20%)
TM helix 5 202..225 CDD:320223 6/22 (27%)
TM helix 6 262..284 CDD:320223 11/21 (52%)
TM helix 7 302..327 CDD:320223 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..396 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24230
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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