DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Lpar6

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_780325.1 Gene:Lpar6 / 67168 MGIID:1914418 Length:344 Species:Mus musculus


Alignment Length:308 Identity:81/308 - (26%)
Similarity:147/308 - (47%) Gaps:30/308 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYW 104
            :.|..|.::.:.|...|.:.|.:.:....:|:.|...::|||.:||:|| ..:||....:....|
Mouse    19 LYGCMFSMVFVLGLISNCVAIYIFICALKVRNETTTYMINLAMSDLLFV-FTLPFRIFYFATRNW 82

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            |:|...|:....|.....:.||..|..:|:|||||:|:|.:|:.:||:....|..:.:|..|:..
Mouse    83 PFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCIAVWFTVMGG 147

  Fly   170 SVPVAF---THDVVVDYDAKKNITYGMCTFTTNDFLGPRTY--QVTFFIS--SYLLPLMIISGLY 227
            |.|..|   ||       ::.|.|...| |........:||  ::..||.  .:.:|| |::...
Mouse   148 SAPAVFFQSTH-------SQGNNTSEAC-FENFPAATWKTYLSRIVIFIEIVGFFIPL-ILNVTC 203

  Fly   228 MRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKL 292
            ..|::|...:  .|.:|: |:..:.:|.:::.|.::.|...::|..:.|:|.||  :.|.|....
Mouse   204 SSMVLRTLNK--PVTLSR-SKMNKTKVLKMIFVHLVIFCFCFVPYNINLILYSL--MRTQTFVNC 263

  Fly   293 VIQVTAQT-------LAYSSSCINPLLYAFLSENFRKAFYKAVNCSSR 333
            .:....:|       :|.|:.|.:|::|.|.|:..:.:. |..|.|.|
Mouse   264 SVVAAVRTMYPITLCIAVSNCCFDPIVYYFTSDTIQNSI-KMKNWSVR 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 77/297 (26%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 8/32 (25%)
TM helix 6 249..279 CDD:320224 5/29 (17%)
TM helix 7 292..317 CDD:320224 7/31 (23%)
Lpar6NP_780325.1 7tmA_LPAR6_P2Y5 18..302 CDD:320284 77/297 (26%)
TM helix 1 18..45 CDD:320284 5/25 (20%)
TM helix 2 52..77 CDD:320284 10/25 (40%)
TM helix 3 89..119 CDD:320284 11/29 (38%)
TM helix 4 131..153 CDD:320284 5/21 (24%)
TM helix 5 181..210 CDD:320284 6/29 (21%)
TM helix 6 222..252 CDD:320284 5/29 (17%)
TM helix 7 270..295 CDD:320284 7/24 (29%)

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