DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and prlhr2a

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:355 Identity:107/355 - (30%)
Similarity:173/355 - (48%) Gaps:41/355 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTM-------LANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLL 58
            :||.||       :..:.|.:|.:.:....|...|   .:....|.|:. .:.::.:.|.|||.|
Zfish    18 LENVTMENSSVGRIYEVMLQSTNSTKRNPQFVGVE---LLQSFKPLIIP-CYALVVLVGVFGNYL 78

  Fly    59 VILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFT-ATDYMVYYWPYGRFWCRSVQYLIVVTA 122
            ::.|:.....|.:.||..|.|||.:|::....|:||| |..:....|.:|||.|..|..:..||.
Zfish    79 LLYVICQTKKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAFNPRGWVFGRFMCYLVFLIQPVTV 143

  Fly   123 FASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTL----WIVVLVVSVPVAFTHDVVVDY 183
            :.|::||..:.:||:.|.|||::.|      |:::|...|    ||:...:..| |..|...|::
Zfish   144 YVSVFTLTAIGVDRYYATVHPLKKR------ISVLACTYLLSGIWILSCGLVAP-AVAHTYHVEF 201

  Fly   184 DAKKNITYGMCTFTTNDF-LGPRTYQV-----TFFISSYLLPLMIISGLYMRMIMRLWR---QGT 239
               |:..:.:|    .:| :|....::     |.|| :|:|||..:...|:.:.::|..   .|.
Zfish   202 ---KDEGFTIC----EEFWMGQEKERLAYAYSTLFI-TYVLPLSALCISYLCISVKLRNCVVPGH 258

  Fly   240 GVRMSKESQRGRKRVT-RLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAY 303
            ..:...|:||.|||.| |||.:||.||...|||:.:..:|:.:|:...:....|:||:.......
Zfish   259 RTQSQAEAQRARKRKTFRLVSLVVAAFGICWLPISVFNVLRDIDIDLIDKRYFLLIQLLCHLCGM 323

  Fly   304 SSSCINPLLYAFLSENFRKAFYKAVNCSSR 333
            ||||.||.|||:|.:.||....|...|..|
Zfish   324 SSSCCNPFLYAWLHDRFRAELRKMFTCHRR 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 95/299 (32%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 12/26 (46%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 5/23 (22%)
TM helix 5 204..233 CDD:320224 8/33 (24%)
TM helix 6 249..279 CDD:320224 15/30 (50%)
TM helix 7 292..317 CDD:320224 12/24 (50%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 96/300 (32%)
TM helix 1 60..86 CDD:320516 7/26 (27%)
TM helix 2 93..118 CDD:320516 11/24 (46%)
TM helix 3 132..162 CDD:320516 10/29 (34%)
TM helix 4 173..194 CDD:320516 6/21 (29%)
TM helix 5 220..249 CDD:320516 8/29 (28%)
TM helix 6 269..299 CDD:320516 14/29 (48%)
TM helix 7 312..337 CDD:320516 12/24 (50%)

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