DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Npffr1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_006256547.1 Gene:Npffr1 / 64107 RGDID:621570 Length:468 Species:Rattus norvegicus


Alignment Length:293 Identity:90/293 - (30%)
Similarity:153/293 - (52%) Gaps:27/293 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIV 119
            ||.||..:|:.|.:||:.||:.|:|||.:||:..|.|:|.|..|.::..||:....|:....:..
  Rat    96 GNTLVCFIVLKNRHMRTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNATCKMSGLVQG 160

  Fly   120 VTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFT-------H 177
            ::..||::|||.::::||..:|||.|.::  |....|..|..:|.:.|::..|.|.|       |
  Rat   161 MSVSASVFTLVAIAVERFRCIVHPFREKL--TLRKALFTIAVIWALALLIMCPSAVTLTVTREEH 223

  Fly   178 DVVVDYDAKKNITYGM--CTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTG 240
            ..::|   .:|.:|.:  |.....:....:.|....|...||:||.:|..:|:|:..:|.:....
  Rat   224 HFMLD---ARNRSYPLYSCWEAWPEKGMRKVYTAVLFAHIYLVPLALIVVMYVRIARKLCQAPGP 285

  Fly   241 VRMSKE-------SQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQV-- 296
            .|.::|       :.|.|.||..::|:|.:.|...|||:.::|||  :|..|.:.|...::.|  
  Rat   286 ARDTEEAVAEGGRTSRRRARVVHMLVMVALFFTLSWLPLWVLLLL--IDYGELSELQLHLLSVYA 348

  Fly   297 --TAQTLAYSSSCINPLLYAFLSENFRKAFYKA 327
              .|..||:..|..||::|.:.:||||:.|..|
  Rat   349 FPLAHWLAFFHSSANPIIYGYFNENFRRGFQAA 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 88/288 (31%)
TM helix 1 40..66 CDD:320224 5/10 (50%)
TM helix 2 73..99 CDD:320224 12/25 (48%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 9/28 (32%)
TM helix 6 249..279 CDD:320224 12/29 (41%)
TM helix 7 292..317 CDD:320224 8/28 (29%)
Npffr1XP_006256547.1 7tmA_NPFFR1 80..378 CDD:320647 88/288 (31%)
TM helix 1 81..107 CDD:320647 5/10 (50%)
TM helix 2 114..140 CDD:320647 12/25 (48%)
TM helix 3 152..182 CDD:320647 8/29 (28%)
TM helix 4 193..214 CDD:320647 5/20 (25%)
TM helix 5 249..278 CDD:320647 9/28 (32%)
TM helix 6 301..331 CDD:320647 13/31 (42%)
TM helix 7 346..371 CDD:320647 8/24 (33%)

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