DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and Rgr

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_067315.1 Gene:Rgr / 57811 MGIID:1929473 Length:291 Species:Mus musculus


Alignment Length:323 Identity:70/323 - (21%)
Similarity:129/323 - (39%) Gaps:62/323 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWP 105
            ||....:.|::|...|.|.|.......::|:.:||::::||.||....:..: ..|...::..||
Mouse    19 VGTVLLMEALSGISLNGLTIFSFCKTPDLRTPSNLLVLSLALADTGISLNAL-VAAVSSLLRRWP 82

  Fly   106 YGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWI-VVLVV 169
            :|...|:...:....||.|||.....::..|:    |...:|.....:..:..::.:|: .....
Mouse    83 HGSEGCQVHGFQGFATALASICGSAAVAWGRY----HHYCTRRQLAWDTAIPLVLFVWMSSAFWA 143

  Fly   170 SVP-VAFTHDVVVDYDAKKNITYGMCTFTTNDF-LGPRTYQVTFFIS----SYLLPLMIISGLYM 228
            |:| :.:.|   .||:     ..|.|  .|.|: .|.|.: ::|..:    ::|:||.|....|.
Mouse   144 SLPLMGWGH---YDYE-----PVGTC--CTLDYSRGDRNF-ISFLFTMAFFNFLVPLFITHTSYR 197

  Fly   229 RMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASL---WLPVQLILLLKSL-DVIETNTL 289
            .|..:..|.|                 .|.|...:....|   |.|..|:.|..:: ||...:..
Mouse   198 FMEQKFSRSG-----------------HLPVNTTLPGRMLLLGWGPYALLYLYAAIADVSFISPK 245

  Fly   290 TKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCART 352
            .::|..:.|:|:    ..||.:.|         |.::.:.|...:|..:     |:|:...||
Mouse   246 LQMVPALIAKTM----PTINAINY---------ALHREMVCRGTWQCLS-----PQKSKKDRT 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 25/116 (22%)
7tm_1 55..313 CDD:278431 58/268 (22%)
RgrNP_067315.1 Csx17_I-U <38..>139 CDD:276221 22/105 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837209
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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