DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tacr1b

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001268728.1 Gene:tacr1b / 564017 ZFINID:ZDB-GENE-091117-17 Length:412 Species:Danio rerio


Alignment Length:353 Identity:88/353 - (24%)
Similarity:160/353 - (45%) Gaps:57/353 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVY- 102
            |.:.:.  .|.:....||:.||.:::.:..||:.||..:||||.|:...    ..|......:| 
Zfish    42 WAIAYC--TIVLVSVVGNITVIWIILAHKRMRTVTNYFLVNLAFAEASM----SAFNTVINFIYA 100

  Fly   103 ---YWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWI 164
               .|.:|..:||...:..:...|||||::..:::||::|::||::.|:...|  |.:.:..:|.
Zfish   101 VHNEWYFGLVYCRFHNFFPIAAVFASIYSMTAIALDRYMAIIHPLQQRLSSAE--TKLVVCVIWA 163

  Fly   165 VVLVVSVPVAFTHDV------VVDYDAKKNIT---YGMCTFTTNDFLGPRTYQVTFFISSYLLPL 220
            :.|:::.|..:....      ||.|     |.   |.|..|       .:||.|...:..|.|||
Zfish   164 LALMLAFPQYYFSSTAQLPGRVVCY-----INWPEYSMWDF-------QKTYYVCVVVLIYFLPL 216

  Fly   221 MIISGLYMRMIMRLWRQ---GTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSL- 281
            :::...|:.:...||..   |......:|....:::|.::::|||..||:.|||..:..::... 
Zfish   217 LVMGCAYLVVGCFLWASEIPGDSSDRYREQLIAKRKVVKMMIVVVCTFATCWLPYHVYFIVHQFL 281

  Fly   282 -DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVN---C------------ 330
             .:.|...:.::.:.:  ..||.||:..||::|..|::.||..|.:|.:   |            
Zfish   282 PHLFEERYIQQVYLGI--MWLAMSSTMYNPIIYCLLNDRFRAGFQQAFSWCPCVPQGSYEGLELK 344

  Fly   331 SSRY-QNYTSDLPPPR-KTSCARTSTTG 356
            |:|| |...|.....| :|:.:....||
Zfish   345 STRYLQTQASIFRASRMETTVSTVMPTG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 76/302 (25%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 8/25 (32%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
tacr1bNP_001268728.1 7tm_GPCRs 40..323 CDD:475119 76/302 (25%)
TM helix 1 42..66 CDD:410628 6/25 (24%)
TM helix 2 75..97 CDD:410628 7/25 (28%)
TM helix 3 113..135 CDD:410628 6/21 (29%)
TM helix 4 156..172 CDD:410628 2/15 (13%)
TM helix 5 201..224 CDD:410628 7/22 (32%)
TM helix 6 254..276 CDD:410628 8/21 (38%)
TM helix 7 291..316 CDD:410628 7/26 (27%)

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