DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tacr3l

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001243564.1 Gene:tacr3l / 559201 ZFINID:ZDB-GENE-061207-19 Length:395 Species:Danio rerio


Alignment Length:342 Identity:86/342 - (25%)
Similarity:160/342 - (46%) Gaps:67/342 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NATRNEENITSFFTDEEW-LAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLM 76
            |.||   |.|:.|....| :|:     |.|. :..|:|: ..||||:||.:::.:..||:.||..
Zfish     9 NVTR---NFTNQFVQPPWRVAV-----WSVA-YSSVLAV-AVFGNLIVIWIILAHKRMRTVTNYF 63

  Fly    77 IVNLAAADLMFVILCIPFTATDYMVY----YWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRF 137
            ::|||.:|....    .|......:|    .|.:|..:|:...:..|...|||||::..:::||:
Zfish    64 LLNLAFSDASMA----AFNTLINFIYATHGEWYFGEVYCKFHNFFPVTAVFASIYSMTAIAVDRY 124

  Fly   138 LAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFL 202
            :|::||::.|:..|  .|.:.||.:|.:.::::.|                    :|.::|...:
Zfish   125 MAIIHPLKPRLSAT--ATKVVIVCIWALAVILAFP--------------------LCFYSTTRTM 167

  Fly   203 GPRT---------------YQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQ---- 248
            ..||               |.:...:..|:|||:::...|..:.:.||    |..:..:|.    
Zfish   168 PRRTICYVAWPRPAEDSFMYHIIVTVLVYMLPLVVMGITYTIVGVTLW----GGEIPGDSSDNYV 228

  Fly   249 ---RGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINP 310
               |.:::|.::::|||:.||..|||..:..::..|:.......:...:.::...||.||:..||
Zfish   229 GQLRAKRKVVKMMIVVVVTFALCWLPYHIYFIVTGLNKRLNKWKSIQQVYLSVLWLAMSSTMYNP 293

  Fly   311 LLYAFLSENFRKAFYKA 327
            ::|..|:..||..|.:|
Zfish   294 IIYCCLNGRFRAGFKRA 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 76/310 (25%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 7/25 (28%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 8/43 (19%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
tacr3lNP_001243564.1 7tm_GPCRs 26..307 CDD:475119 77/317 (24%)
TM helix 1 28..52 CDD:320669 10/25 (40%)
TM helix 2 61..83 CDD:320669 6/25 (24%)
TM helix 3 99..121 CDD:320669 6/21 (29%)
TM helix 4 142..158 CDD:320669 4/35 (11%)
TM helix 5 185..208 CDD:320669 5/22 (23%)
TM helix 6 238..260 CDD:320669 8/21 (38%)
TM helix 7 275..300 CDD:320669 7/24 (29%)

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