DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and LOC556532

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_684448.3 Gene:LOC556532 / 556532 -ID:- Length:366 Species:Danio rerio


Alignment Length:324 Identity:102/324 - (31%)
Similarity:180/324 - (55%) Gaps:26/324 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMI 77
            |.:|.:.|:::....:|.|..:..:..:|.:.  ::.:.|..||.||:.|::....|::.||:.|
Zfish    14 NDSRFQGNLSALDEVDEPLPRSAKITIVVVYL--IVCVVGLVGNCLVMYVIIRYTKMKTATNIYI 76

  Fly    78 VNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVH 142
            .|||.||.: |:..:||..||.::.:||:|...|::|..:.....|.|::||.:||:||::||.|
Zfish    77 FNLALADAL-VLATLPFQGTDVILGFWPFGLPLCKAVVAIDYYNMFTSVFTLTVMSVDRYIAVCH 140

  Fly   143 PIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVV-DYDAKKNITYGMCTFTTNDFLGP-- 204
            |:||..:||.....:..|.:|::...|.:|......|.. |:|..:      |..:..:   |  
Zfish   141 PVRSLTVRTPLRAKLINVAVWVLASAVGLPAMIMGQVEKDDHDGAE------CMVSLPE---PRK 196

  Fly   205 ---RTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRM---SKESQRGRKRVTRLVVVVVI 263
               |.:.:..|:.|:|:|::|||..|..|:.||    ..||:   |:|..|..:|:|.:|:.||.
Zfish   197 HWDRVFMMCVFLFSFLIPVLIISVCYGLMVRRL----RSVRVLSGSREKDRNLRRITYMVLSVVA 257

  Fly   264 AFASLWLPVQLILLLKSLDVIETN-TLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYK 326
            ||...|:|||::.|:::|..:|.. :.:.:........|.|::||:||:|||||.|||::.|::
Zfish   258 AFVFCWMPVQVLALIQALGHVELGASQSSMAAMHFCIALGYANSCLNPVLYAFLDENFKRCFHE 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 96/294 (33%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 12/25 (48%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 11/33 (33%)
TM helix 6 249..279 CDD:320224 13/29 (45%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
LOC556532XP_684448.3 7tm_GPCRs 38..319 CDD:475119 96/296 (32%)
TM helix 1 40..64 CDD:320220 7/25 (28%)
TM helix 2 73..94 CDD:320220 10/21 (48%)
TM helix 3 110..132 CDD:320220 6/21 (29%)
TM helix 4 155..171 CDD:320220 3/15 (20%)
TM helix 5 200..223 CDD:320220 8/22 (36%)
TM helix 6 249..271 CDD:320220 10/21 (48%)
TM helix 7 287..312 CDD:320220 10/24 (42%)

Return to query results.
Submit another query.