DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tacr3a

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001243567.1 Gene:tacr3a / 555482 ZFINID:ZDB-GENE-090312-106 Length:399 Species:Danio rerio


Alignment Length:328 Identity:88/328 - (26%)
Similarity:167/328 - (50%) Gaps:42/328 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TRNEENITSFFTDE----EW-LAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTN 74
            ::|..|:|..||::    .| :|:     |.|. :..::|| ..||||:|:.:::.:..||:.||
Zfish     4 SQNGSNLTGNFTNQFVQPPWRVAL-----WSVA-YSSILAI-AVFGNLIVMWIILAHKRMRTVTN 61

  Fly    75 LMIVNLAAADLMFVILCIPFTATDYMVYY----WPYGRFWCRSVQYLIVVTAFASIYTLVLMSID 135
            ..::|||.:|....    .|......||.    |.:|..:|:...:..|.:.|||||::..:::|
Zfish    62 YFLLNLAFSDASMA----AFNTLINFVYATHGDWYFGEAYCKFHNFFPVTSVFASIYSMSAIAVD 122

  Fly   136 RFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTND 200
            |::|::||::.|:..|  .|.:.||.:|::.:|::.|:.|..  .:....|:.:.|......:.|
Zfish   123 RYMAIIHPLKPRLSAT--ATKVIIVCIWVLAVVLAFPLCFFS--TIKKLPKRTLCYVAWPRPSED 183

  Fly   201 FLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQ-------RGRKRVTRLV 258
               |..|.:...:..|:|||:::...|..:.:.||    |..:..:|.       |.:::|.:::
Zfish   184 ---PFMYHIIVAMLVYVLPLVVMGINYTIVGLTLW----GGEIPGDSSDNYQGQLRAKRKVVKMM 241

  Fly   259 VVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQV--TAQTLAYSSSCINPLLYAFLSENFR 321
            ::||:.||..|||..:..|:..|:  :.....|.:.|:  :...||.||:..||::|..|:..||
Zfish   242 IIVVVTFAFCWLPYHVYFLVTGLN--KQLARWKFIQQIYLSIMWLAMSSTMYNPIIYCCLNSRFR 304

  Fly   322 KAF 324
            ..|
Zfish   305 AGF 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 80/297 (27%)
TM helix 1 40..66 CDD:320224 8/25 (32%)
TM helix 2 73..99 CDD:320224 7/25 (28%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 7/28 (25%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 8/26 (31%)
tacr3aNP_001243567.1 7tm_GPCRs 26..307 CDD:475119 81/304 (27%)
TM helix 1 28..52 CDD:320669 9/25 (36%)
TM helix 2 61..83 CDD:320669 6/25 (24%)
TM helix 3 99..121 CDD:320669 6/21 (29%)
TM helix 4 142..158 CDD:320669 4/15 (27%)
TM helix 5 185..208 CDD:320669 5/22 (23%)
TM helix 6 238..260 CDD:320669 7/21 (33%)
TM helix 7 275..300 CDD:320669 8/24 (33%)

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