DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and cysltr1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001018484.1 Gene:cysltr1 / 553675 ZFINID:ZDB-GENE-050522-250 Length:342 Species:Danio rerio


Alignment Length:346 Identity:92/346 - (26%)
Similarity:155/346 - (44%) Gaps:59/346 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY-----W 104
            :.:|.:.|..||...:.|::......|..::.::||..:||    ||:. |....::||     |
Zfish    22 YSIITVFGLMGNGFALYVLLRTYRQTSAFHIYMLNLGVSDL----LCVS-TLPLRVLYYINKGQW 81

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            ..|.|.||...|.:.|..:.|::.::.||..||||:|.|:::..:.||....|..|.:||.:.:.
Zfish    82 NLGDFLCRLSSYALYVNLYCSVFFMMAMSFTRFLAIVFPVQNLRLATEKKAWIVCVCIWIFICMT 146

  Fly   170 SVPVAFT--HDVVVDYDAKKNITYGMCTFTTNDFLGP-------RTYQVTFF--ISSYLLPLMII 223
            |.|...:  |.     |...|        .|..|..|       :...:.:|  :..:::|.::|
Zfish   147 SSPFLLSGQHT-----DPLTN--------KTKCFEPPEKPGSLDKLIMLNYFSLVVGFIIPFLVI 198

  Fly   224 SGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLP--VQLILLL-----KSL 281
            ...|..::..|.|..:|....:.:   |.:..||::||::||...::|  :|..|.|     ||.
Zfish   199 LLCYAGILRTLLRNTSGANKQRYT---RNKAIRLIIVVMLAFLISFMPYHIQRTLHLHFKSRKSA 260

  Fly   282 DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR---KAFYKA-----VNCSSRYQNYT 338
            ...|.|.:.|.|  |....||.::||.:|:||.|..||||   ..|.:|     :....|:...:
Zfish   261 TCEEVNYMQKSV--VITLCLAAANSCFDPMLYFFSGENFRHRLSTFRRASGNAILPHKGRHPLQS 323

  Fly   339 SDLPPPRKT---SCARTSTTG 356
            |  ||...:   ||..::|.|
Zfish   324 S--PPAEDSELQSCNGSNTHG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 82/304 (27%)
TM helix 1 40..66 CDD:320224 5/20 (25%)
TM helix 2 73..99 CDD:320224 7/25 (28%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 5/37 (14%)
TM helix 6 249..279 CDD:320224 11/36 (31%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
cysltr1NP_001018484.1 7tmA_CysLTR1 16..301 CDD:320286 82/301 (27%)
TM helix 1 16..43 CDD:320286 5/20 (25%)
TM helix 2 50..75 CDD:320286 7/29 (24%)
TM helix 3 88..118 CDD:320286 11/29 (38%)
TM helix 4 130..152 CDD:320286 6/21 (29%)
TM helix 5 179..208 CDD:320286 4/28 (14%)
TM helix 6 221..251 CDD:320286 9/32 (28%)
TM helix 7 269..294 CDD:320286 11/26 (42%)

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