DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Sstr2

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_062221.1 Gene:Sstr2 / 54305 RGDID:3763 Length:369 Species:Rattus norvegicus


Alignment Length:336 Identity:109/336 - (32%)
Similarity:179/336 - (53%) Gaps:47/336 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ITS--FFTDEEWLA----INGTL----------PW-------IVGFFFGVIAITGFFGNLLVILV 62
            :||  |...:.|:.    :||:|          |:       ::.|.:.|:.:.|..||.|||.|
  Rat     3 LTSEQFNGSQVWIPSPFDLNGSLGPSNGSNQTEPYYDMTSNAVLTFIYFVVCVVGLCGNTLVIYV 67

  Fly    63 VVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIY 127
            ::....|::.||:.|:|||.||.:| :|.:||.|....:.:||:|:..||.|..:..:..|.||:
  Rat    68 ILRYAKMKTITNIYILNLAIADELF-MLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSIF 131

  Fly   128 TLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYG 192
            .|.:|||||:|||||||:|...|......:..|.:|.|.|:|.:|:..       |...::..:|
  Rat   132 CLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWGVSLLVILPIMI-------YAGLRSNQWG 189

  Fly   193 MCTFTTN-------DFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRM-SKESQR 249
            ..:.|.|       .:.|   :.:..||..:|:||.||...|:.:|:::  :.:|:|: |.:.::
  Rat   190 RSSCTINWPGESGAWYTG---FIIYAFILGFLVPLTIICLCYLFIIIKV--KSSGIRVGSSKRKK 249

  Fly   250 GRKRVTRLVVVVVIAFASLWLPVQLILLLK-SLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLY 313
            ..|:|||:|.:||..|...|||..:..:.. |:.:..|..|..:...|.  .|.|::||.||:||
  Rat   250 SEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSVAISPTPALKGMFDFVV--ILTYANSCANPILY 312

  Fly   314 AFLSENFRKAF 324
            ||||:||:|:|
  Rat   313 AFLSDNFKKSF 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 100/300 (33%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 13/25 (52%)
TM helix 3 111..141 CDD:320224 14/29 (48%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 9/28 (32%)
TM helix 6 249..279 CDD:320224 11/29 (38%)
TM helix 7 292..317 CDD:320224 11/24 (46%)
Sstr2NP_062221.1 7tmA_SSTR2 44..323 CDD:320637 100/293 (34%)
TM helix 1 45..71 CDD:320637 9/25 (36%)
TM helix 2 78..104 CDD:320637 13/26 (50%)
TM helix 3 115..145 CDD:320637 14/29 (48%)
TM helix 4 157..179 CDD:320637 6/21 (29%)
TM helix 5 205..234 CDD:320637 10/31 (32%)
TM helix 6 249..279 CDD:320637 11/29 (38%)
TM helix 7 291..316 CDD:320637 11/26 (42%)

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