DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and GPR84

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_065103.1 Gene:GPR84 / 53831 HGNCID:4535 Length:396 Species:Homo sapiens


Alignment Length:380 Identity:82/380 - (21%)
Similarity:141/380 - (37%) Gaps:129/380 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWC 111
            |:|:||..||:|.:|.:.....:|:..||:|.||..|||::..|..||:...|:..:|..|..:|
Human    29 VVAVTGTVGNVLTLLALAIQPKLRTRFNLLIANLTLADLLYCTLLQPFSVDTYLHLHWRTGATFC 93

  Fly   112 RSVQYLIVVTAFASIYTLVLMSIDRFLAVVHP-IRSRMMRTENITLIAIVTLWIV---------V 166
            |....|:..:...||.||.|:::.|:|.:.|| :..::...:.|.| |:|:.|:|         .
Human    94 RVFGLLLFASNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGIVL-ALVSTWVVGVASFAPLWP 157

  Fly   167 LVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIIS------- 224
            :.:.|||..|                 |:|   |.:..|.|........::|.|..:.       
Human   158 IYILVPVVCT-----------------CSF---DRIRGRPYTTILMGIYFVLGLSSVGIFYCLIH 202

  Fly   225 ---------------------------------GLYMRMIMRLWRQGTGVRMSKE---------- 246
                                             |.:..:..||...|....:|.|          
Human   203 RQVKRAAQALDQYKLRQASIHSNHVARTDEAMPGRFQELDSRLASGGPSEGISSEPVSAATTQTL 267

  Fly   247 ------------SQRGRK------------------------------RVTRLVVVVVIAFASLW 269
                        |:|.::                              :|||:...|.:.||..:
Human   268 EGDSSEVGDQINSKRAKQMAEKSPPEASAKAQPIKGARRAPDSSSEFGKVTRMCFAVFLCFALSY 332

  Fly   270 LPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAF 324
            :|..|      |::::.......|:.:.|..|.:.:.||||:|||.::..||:|:
Human   333 IPFLL------LNILDARVQAPRVVHMLAANLTWLNGCINPVLYAAMNRQFRQAY 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/378 (21%)
TM helix 1 40..66 CDD:320224 8/18 (44%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 7/28 (25%)
TM helix 5 204..233 CDD:320224 5/68 (7%)
TM helix 6 249..279 CDD:320224 9/59 (15%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
GPR84NP_065103.1 7tmA_GPR84-like 21..381 CDD:320338 81/378 (21%)
TM helix 1 22..48 CDD:320338 8/18 (44%)
TM helix 2 55..78 CDD:320338 11/22 (50%)
TM helix 3 93..123 CDD:320338 10/29 (34%)
TM helix 4 137..155 CDD:320338 6/18 (33%)
TM helix 5 175..200 CDD:320338 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..311 7/66 (11%)
TM helix 6 312..342 CDD:320338 9/35 (26%)
TM helix 7 349..374 CDD:320338 10/24 (42%)

Return to query results.
Submit another query.