DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and GPR84

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_065103.1 Gene:GPR84 / 53831 HGNCID:4535 Length:396 Species:Homo sapiens


Alignment Length:380 Identity:82/380 - (21%)
Similarity:141/380 - (37%) Gaps:129/380 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWC 111
            |:|:||..||:|.:|.:.....:|:..||:|.||..|||::..|..||:...|:..:|..|..:|
Human    29 VVAVTGTVGNVLTLLALAIQPKLRTRFNLLIANLTLADLLYCTLLQPFSVDTYLHLHWRTGATFC 93

  Fly   112 RSVQYLIVVTAFASIYTLVLMSIDRFLAVVHP-IRSRMMRTENITLIAIVTLWIV---------V 166
            |....|:..:...||.||.|:::.|:|.:.|| :..::...:.|.| |:|:.|:|         .
Human    94 RVFGLLLFASNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGIVL-ALVSTWVVGVASFAPLWP 157

  Fly   167 LVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIIS------- 224
            :.:.|||..|                 |:|   |.:..|.|........::|.|..:.       
Human   158 IYILVPVVCT-----------------CSF---DRIRGRPYTTILMGIYFVLGLSSVGIFYCLIH 202

  Fly   225 ---------------------------------GLYMRMIMRLWRQGTGVRMSKE---------- 246
                                             |.:..:..||...|....:|.|          
Human   203 RQVKRAAQALDQYKLRQASIHSNHVARTDEAMPGRFQELDSRLASGGPSEGISSEPVSAATTQTL 267

  Fly   247 ------------SQRGRK------------------------------RVTRLVVVVVIAFASLW 269
                        |:|.::                              :|||:...|.:.||..:
Human   268 EGDSSEVGDQINSKRAKQMAEKSPPEASAKAQPIKGARRAPDSSSEFGKVTRMCFAVFLCFALSY 332

  Fly   270 LPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAF 324
            :|..|      |::::.......|:.:.|..|.:.:.||||:|||.::..||:|:
Human   333 IPFLL------LNILDARVQAPRVVHMLAANLTWLNGCINPVLYAAMNRQFRQAY 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 39/117 (33%)
7tm_1 55..313 CDD:278431 72/359 (20%)
GPR84NP_065103.1 7tmA_GPR84-like 21..381 CDD:320338 81/378 (21%)
TM helix 1 22..48 CDD:320338 8/18 (44%)
TM helix 2 55..78 CDD:320338 11/22 (50%)
TM helix 3 93..123 CDD:320338 10/29 (34%)
TM helix 4 137..155 CDD:320338 6/18 (33%)
TM helix 5 175..200 CDD:320338 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..311 7/66 (11%)
TM helix 6 312..342 CDD:320338 9/35 (26%)
TM helix 7 349..374 CDD:320338 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24230
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.