DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Qrfprl

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001102709.1 Gene:Qrfprl / 500157 RGDID:1560028 Length:415 Species:Rattus norvegicus


Alignment Length:306 Identity:84/306 - (27%)
Similarity:146/306 - (47%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYW 104
            :.|.....:|:   |||.||:.||..:..||:.||:.|.:||.:||:.|..|||.|....:...|
  Rat    49 LAGLLIFALAL---FGNALVVYVVTRSKAMRTVTNIFICSLALSDLLIVFFCIPVTMLQNVSDTW 110

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            ..|.|.|:.|.::........|.|:..::::|...:|||.:.:...|.......:..:|:|.:::
  Rat   111 LGGAFICKMVPFVQCTAVVTEILTMTCIAVERHQGLVHPFKMKQQYTNQRAFTMLGVVWLVAIII 175

  Fly   170 SVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRL 234
            ..|:.....:.:.||......:..|....:..:..:.|.....::.:||||:::|.||.::...|
  Rat   176 GSPMWHVQRLEIKYDFLYEKEHICCLEEWSSPVHQKIYTTFILVTLFLLPLLLLSVLYGKIGYEL 240

  Fly   235 W---RQGTGVRM----SKES---QRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTL 289
            |   |.|.|..:    .||.   .|.:||...::|.||:.||..|.|..::.::     ||.:..
  Rat   241 WIKKRVGDGSVLRTIHGKEMFKIARKKKRAVIMMVTVVVLFAVCWAPFHVVHMM-----IEYSNF 300

  Fly   290 TKLVIQVT-------AQTLAYSSSCINPLLYAFLSENFRKAFYKAV 328
            .|...:||       .|.:.:.:|..||::||.::|||:|.|..||
  Rat   301 EKEYDEVTIKMIFAIVQIIGFFNSICNPIVYALMNENFKKNFVSAV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/300 (27%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 12/25 (48%)
TM helix 3 111..141 CDD:320224 5/29 (17%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 8/31 (26%)
QrfprlNP_001102709.1 7tmA_QRFPR 60..342 CDD:320333 79/286 (28%)
TM helix 2 79..105 CDD:320333 12/25 (48%)
TM helix 3 117..147 CDD:320333 5/29 (17%)
TM helix 4 160..181 CDD:320333 3/20 (15%)
TM helix 5 210..235 CDD:320333 8/24 (33%)
TM helix 6 265..295 CDD:320333 10/34 (29%)
TM helix 7 310..335 CDD:320333 6/24 (25%)

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