DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and RYa-R

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster


Alignment Length:371 Identity:90/371 - (24%)
Similarity:169/371 - (45%) Gaps:44/371 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNN 67
            |.|::.|.|.:.       ....:::.|.:....:  ||...:..|.|....||..|..:|....
  Fly    79 NITVMMNFSCDD-------YDLLSEDMWSSAYFKI--IVYMLYIPIFIFALIGNGTVCYIVYSTP 134

  Fly    68 NMRSTTNLMIVNLAAADLMFVILCIPFTATD-YMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVL 131
            .||:.||..|.:||..|::....|:|.:... :::.|||:|...|..|.|...|:...|.||||.
  Fly   135 RMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLALCHFVNYSQAVSVLVSAYTLVA 199

  Fly   132 MSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYD-----AKKNITY 191
            :||||::|::.|::.|:  |:......|..:|.:.|..::|:.....:.:...     .:|.|..
  Fly   200 ISIDRYIAIMWPLKPRI--TKRYATFIIAGVWFIALATALPIPIVSGLDIPMSPWHTKCEKYICR 262

  Fly   192 GMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLW-RQGTGVRMSKESQ---RGRK 252
            .|....|.::.    |.::.|...:::||.::...|.|:.:|:| ::..|...:...|   |.::
  Fly   263 EMWPSRTQEYY----YTLSLFALQFVVPLGVLIFTYARITIRVWAKRPPGEAETNRDQRMARSKR 323

  Fly   253 RVTRLVVVVVIAFASLWLPVQLI-LLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFL 316
            ::.::::.|||.|...|||..:: |||...:....:.|.  .:......||.|..|.||::|.::
  Fly   324 KMVKMMLTVVIVFTCCWLPFNILQLLLNDEEFAHWDPLP--YVWFAFHWLAMSHCCYNPIIYCYM 386

  Fly   317 SENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCART------STTG 356
            :..||..|.:.::          .:|..|:..|.|:      :|:|
  Fly   387 NARFRSGFVQLMH----------RMPGLRRWCCLRSVGDRMNATSG 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 78/295 (26%)
TM helix 1 40..66 CDD:320224 8/25 (32%)
TM helix 2 73..99 CDD:320224 8/26 (31%)
TM helix 3 111..141 CDD:320224 14/29 (48%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 6/28 (21%)
TM helix 6 249..279 CDD:320224 10/30 (33%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
RYa-RNP_001287552.1 7tmA_PR4-like 106..394 CDD:320514 78/297 (26%)
TM helix 1 107..133 CDD:320514 8/25 (32%)
TM helix 2 140..165 CDD:320514 8/24 (33%)
TM helix 3 179..209 CDD:320514 14/29 (48%)
TM helix 4 220..241 CDD:320514 4/20 (20%)
TM helix 5 271..300 CDD:320514 6/32 (19%)
TM helix 6 320..350 CDD:320514 9/29 (31%)
TM helix 7 362..387 CDD:320514 7/26 (27%)

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