DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and sNPF-R

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster


Alignment Length:418 Identity:99/418 - (23%)
Similarity:174/418 - (41%) Gaps:84/418 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEW-LAINGTLPWIVG---------------------F 43
            |.|.:.|:.|:..::....:.....:...| |...||...|:.                     |
  Fly     1 MANLSWLSTITTTSSSISTSQLPLVSTTNWSLTSPGTTSAILADVAASDEDRSGGIIHNQFVQIF 65

  Fly    44 F---FGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWP 105
            |   :..:.:.|.|||:||..||:.|..|::.||:.|.|||.:|::..:|.:|||.....:..|.
  Fly    66 FYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWA 130

  Fly   106 YGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVS 170
            :||..|..|.:....:.:.|..||..::|||:..:::|...||..:..|.:  ||::|::.|:.:
  Fly   131 FGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGI--IVSIWVIALLAT 193

  Fly   171 VP----VAFTHDVV----------------------------VDYDAKKNITYGMCTFTTNDFLG 203
            ||    :..|:::|                            ::.....:.|.......|....|
  Fly   194 VPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTG 258

  Fly   204 PRTYQVTFFIS-------------------SYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQR 249
            |....|..:..                   .::||..|||..|:.:.::|.::......||.|:|
  Fly   259 PEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSRR 323

  Fly   250 ------GRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCI 308
                  .:||..|:::.:|..|...|||:.::.:....|.........::....|.::|.||:|.
  Fly   324 EEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSSTCY 388

  Fly   309 NPLLYAFLSENFRKAFYKAVNCSSRYQN 336
            ||.|||:|:|||||.|...:.|.:...|
  Fly   389 NPFLYAWLNENFRKEFKHVLPCFNPSNN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 88/365 (24%)
TM helix 1 40..66 CDD:320224 11/49 (22%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 7/23 (30%)
TM helix 5 204..233 CDD:320224 8/47 (17%)
TM helix 6 249..279 CDD:320224 9/35 (26%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 87/341 (26%)
TM helix 1 65..91 CDD:320331 10/25 (40%)
TM helix 2 98..123 CDD:320331 11/24 (46%)
TM helix 3 136..166 CDD:320331 8/29 (28%)
TM helix 4 177..198 CDD:320331 7/22 (32%)
TM helix 5 278..307 CDD:320331 6/28 (21%)
TM helix 6 329..359 CDD:320331 8/29 (28%)
TM helix 7 372..397 CDD:320331 10/24 (42%)

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