DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and AstC-R1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:433 Identity:126/433 - (29%)
Similarity:185/433 - (42%) Gaps:93/433 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MLANISLNATRNEENITSFFTDE---EWLAINGT-----------LP--------------WIVG 42
            |.|:...|||.......|.:|.|   .|::.:.|           ||              ....
  Fly    17 MTADSEANATNWYNTNESLYTTELNHRWISGSSTIQPEESLYGTDLPTYQHCIATRNSFADLFTV 81

  Fly    43 FFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYG 107
            ..:|.:.|.|.|||.|||.||:..:.|::.||:.|:|||.||..|:| .|||......:..|.:|
  Fly    82 VLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVADECFLI-GIPFLLYTMRICSWRFG 145

  Fly   108 RFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVP 172
            .|.|::......:|:|.|...|::||.||::||.|||.|...||.:|..:.....|....|:.:|
  Fly   146 EFMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLP 210

  Fly   173 VAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQ----VTFFISSYLL----PLMIISGLYMR 229
            |......|...|   .|.|. |     :.:.|..|:    .||.:.::.|    ||..|...|..
  Fly   211 VILYASTVEQED---GINYS-C-----NIMWPDAYKKHSGTTFILYTFFLGFATPLCFILSFYYL 266

  Fly   230 MIMRLWRQG--TGVRMSKESQRGRKRVTRLVVVVVIAFASLWLP--VQLILLLKSLDVIETNTLT 290
            :|.:|...|  .|.: |||.:|..::|||||:.|:..:...|||  :..:.|:.|.......:..
  Fly   267 VIRKLRSVGPKPGTK-SKEKRRAHRKVTRLVLTVISVYILCWLPHWISQVALIHSNPAQRDLSRL 330

  Fly   291 KLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNC------------------------- 330
            :::|.:....|.||:|.:||:|||||||||||:|:||..|                         
  Fly   331 EILIFLLLGALVYSNSAVNPILYAFLSENFRKSFFKAFTCMNKQDINAQLQLEPSVFTKQGSKKR 395

  Fly   331 --SSRYQNYTSDLPP---------------PRKTSCARTSTTG 356
              |.|.......:||               ...|:..:|.|||
  Fly   396 GGSKRLLTSNPQIPPLLPLNAGNNNSSTTTSSTTTAEKTGTTG 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 101/296 (34%)
TM helix 1 40..66 CDD:320224 11/25 (44%)
TM helix 2 73..99 CDD:320224 13/25 (52%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 10/36 (28%)
TM helix 6 249..279 CDD:320224 11/31 (35%)
TM helix 7 292..317 CDD:320224 11/24 (46%)
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 101/296 (34%)
TM helix 1 79..105 CDD:320222 11/25 (44%)
TM helix 2 112..138 CDD:320222 13/26 (50%)
TM helix 3 149..179 CDD:320222 10/29 (34%)
TM helix 4 191..213 CDD:320222 5/21 (24%)
TM helix 5 241..270 CDD:320222 8/28 (29%)
TM helix 6 287..317 CDD:320222 10/29 (34%)
TM helix 7 332..357 CDD:320222 11/24 (46%)

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