DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and CCHa2-R

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length:338 Identity:88/338 - (26%)
Similarity:162/338 - (47%) Gaps:42/338 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DEEWLAIN---------GTLP----------WIVGFFFGVIAITGFFGNLLVILVVVFNNNMRST 72
            ::|.||::         |.:|          :||...:.:|.|.|..||..::::...:.:||:.
  Fly    39 EQEGLALDMGHNASADGGIVPYVPVLDRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNI 103

  Fly    73 TNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRF 137
            .|..|::||.|||:.:::|:|.....|....||:.|..||..::...::...|::||..:|.:|:
  Fly   104 PNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERY 168

  Fly   138 LAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDV--VVDYDAKKNITYGMCTFTTND 200
            .|:|:|:|.  ::|:.:|:...|.:||:.:::.:|.....|:  ...:.|..|:|..:|    :.
  Fly   169 CAIVNPLRK--LQTKPLTVFTAVMIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEVC----SP 227

  Fly   201 FLGPRTYQVTFFISS-----YLLPLMIISGLYMRMIMRLW---RQGTGVRMSKESQ---RGRKRV 254
            |..|.  ...|.::.     |||||.||..||:.|..||.   |...|.:.|.:|:   |.|..|
  Fly   228 FRDPE--YAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHV 290

  Fly   255 TRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKL--VIQVTAQTLAYSSSCINPLLYAFLS 317
            .|:||..|:.|...:.|..:..|.............:.  |:::.....::.:||:||:....:|
  Fly   291 ARMVVAFVVVFFICFFPYHVFELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVS 355

  Fly   318 ENFRKAFYKAVNC 330
            ..||:.|.:.:.|
  Fly   356 GVFRQHFNRYLCC 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/299 (27%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 9/25 (36%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 12/33 (36%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 5/26 (19%)
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 81/299 (27%)
TM helix 1 71..97 CDD:320593 7/25 (28%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 8/29 (28%)
TM helix 4 182..202 CDD:320593 4/19 (21%)
TM helix 5 234..259 CDD:320593 10/24 (42%)
TM helix 6 285..315 CDD:320593 10/29 (34%)
TM helix 7 330..355 CDD:320593 5/24 (21%)

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