DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and HTR1A

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_000515.2 Gene:HTR1A / 3350 HGNCID:5286 Length:422 Species:Homo sapiens


Alignment Length:395 Identity:80/395 - (20%)
Similarity:141/395 - (35%) Gaps:119/395 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYW 104
            |.....|.:......||..|:..:....::::..|.:|.:||..|||..:|.:|..|...::..|
Human    38 ITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW 102

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            ..|:..|.....|.|:...:||..|..:::||:.|:..||.....||.......|...|::..::
Human   103 TLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI 167

  Fly   170 SVPVAF---THDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMI 231
            |:|...   |.:...|.||        ||.:.:     ..|.:.....::.:||:::..||.|:.
Human   168 SIPPMLGWRTPEDRSDPDA--------CTISKD-----HGYTIYSTFGAFYIPLLLMLVLYGRIF 219

  Fly   232 ----------------------------------------MRLWRQGT------------GVRM- 243
                                                    .|.||.|.            .||. 
Human   220 RAARFRIRKTVKKVEKTGADTRHGASPAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQG 284

  Fly   244 ----------------SKE-----SQRG--------------------------RKRVT-RLVVV 260
                            |||     |:.|                          |:|.| :.:.:
Human   285 DDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKMALARERKTVKTLGI 349

  Fly   261 VVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFY 325
            ::..|...|||..::.|:  |...|::.....::......|.||:|.:||::||:.:::|:.||.
Human   350 IMGTFILCWLPFFIVALV--LPFCESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFK 412

  Fly   326 KAVNC 330
            |.:.|
Human   413 KIIKC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 76/387 (20%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 9/29 (31%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 6/68 (9%)
TM helix 6 249..279 CDD:320224 9/56 (16%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
HTR1ANP_000515.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
7tmA_5-HT1A_vertebrates 37..411 CDD:320453 76/387 (20%)
TM helix 1 38..64 CDD:320453 5/25 (20%)
TM helix 2 71..97 CDD:320453 10/25 (40%)
TM helix 3 109..139 CDD:320453 9/29 (31%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 133..135 1/1 (100%)
TM helix 4 151..173 CDD:320453 4/21 (19%)
TM helix 5 192..221 CDD:320453 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..262 0/26 (0%)
TM helix 6 338..368 CDD:320453 8/31 (26%)
TM helix 7 379..404 CDD:320453 8/24 (33%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 396..400 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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