DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Pgr15l

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001100053.1 Gene:Pgr15l / 296867 RGDID:1562685 Length:456 Species:Rattus norvegicus


Alignment Length:349 Identity:95/349 - (27%)
Similarity:170/349 - (48%) Gaps:47/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENTTMLANI---SLN-ATRNEENITSFFTDEEWLAINGTL-PWIVG-----------FFFGVIAI 50
            ||.:.:.:|   |.| .|:|..||:|    .||....||: .|:.|           |.:.||.:
  Rat    24 ENVSWVPSIEDQSCNHTTQNGTNISS----AEWGGPRGTVTKWLGGNPHIMAKIVLTFAYAVIIV 84

  Fly    51 TGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQ 115
            ...|||.||..|.|.:...:.:|.|:|.|||.:|::.::|..||....::...|.:||..|...:
  Rat    85 ISLFGNSLVCQVFVKHKETKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVFGRIMCHVSR 149

  Fly   116 YLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHD-- 178
            :....:...|..||:.:::||...::||::.|:..::::.::.::  |.:.:.:::|.|...:  
  Rat   150 FAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQSLFVVGVI--WSIAVFLALPHAIYQNLF 212

  Fly   179 --VVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTF-----FISSYLLPLMIISGLYMRMIMRLWR 236
              |.:|.|.:        ::....|.||.|....:     ||..|:|||::|.|.|..:..|||.
  Rat   213 TLVNMDGDVR--------SYCLPSFPGPSTLVSKYVDLGTFILLYILPLLVIVGTYSHLGKRLWI 269

  Fly   237 QG----TGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVT 297
            |.    ...|......:.||:..|:::::|:.||..|.|:...::|.|...:|.::    ||...
  Rat   270 QNAIGDASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLNFYVVLISSAGVENDS----VIFYA 330

  Fly   298 AQTLAYSSSCINPLLYAFLSENFR 321
            ....|.||:|.||.:|.:|:.:||
  Rat   331 FHWFAMSSTCYNPFIYCWLNRSFR 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/307 (26%)
TM helix 1 40..66 CDD:320224 11/36 (31%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 1/19 (5%)
TM helix 5 204..233 CDD:320224 11/33 (33%)
TM helix 6 249..279 CDD:320224 8/29 (28%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
Pgr15lNP_001100053.1 7tmA_GPR83 73..357 CDD:320511 79/296 (27%)
TM helix 1 74..100 CDD:320511 10/25 (40%)
TM helix 2 107..132 CDD:320511 10/24 (42%)
TM helix 3 145..175 CDD:320511 6/29 (21%)
TM helix 4 186..207 CDD:320511 2/22 (9%)
TM helix 5 237..266 CDD:320511 9/28 (32%)
TM helix 6 286..316 CDD:320511 8/29 (28%)
TM helix 7 325..350 CDD:320511 9/28 (32%)

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