DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Oprl1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001305876.1 Gene:Oprl1 / 29256 RGDID:68438 Length:396 Species:Rattus norvegicus


Alignment Length:361 Identity:123/361 - (34%)
Similarity:192/361 - (53%) Gaps:41/361 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNN 67
            |.|:..::.|||:.     ::|..    |.:..|   |||.:..| .|.|..||.||:.|::.:.
  Rat    26 NETVPHHLLLNASH-----SAFLP----LGLKVT---IVGLYLAV-CIGGLLGNCLVMYVILRHT 77

  Fly    68 NMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            .|::.||:.|.|||.||.: |:|.:||..||.::.:||:|...|::|..:.....|.|.:||..|
  Rat    78 KMKTATNIYIFNLALADTL-VLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAM 141

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTF- 196
            |:||::|:.||||:..:||.:......|.:|.:..||.||||......|:.:..:      |.. 
  Rat   142 SVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIE------CLVE 200

  Fly   197 --TTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRM---SKESQRGRKRVTR 256
              ...|:.|| .:.:..|:.|:::|::|||..|..||.||    .|||:   |:|..|..:|:||
  Rat   201 IPAPQDYWGP-VFAICIFLFSFIIPVLIISVCYSLMIRRL----RGVRLLSGSREKDRNLRRITR 260

  Fly   257 LVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR 321
            ||:|||..|...|.|||:.:|::.|.| :..:.|.:.|......|.|.:||:||:|||||.|||:
  Rat   261 LVLVVVAVFVGCWTPVQVFVLVQGLGV-QPGSETAVAILRFCTALGYVNSCLNPILYAFLDENFK 324

  Fly   322 KAF---------YKAVNCSSRYQNYTSDLPPPRKTS 348
            ..|         ::.:..|.|.::...|:....|||
  Rat   325 ACFRKFCCASSLHREMQVSDRVRSIAKDVGLGCKTS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 108/290 (37%)
TM helix 1 40..66 CDD:320224 11/25 (44%)
TM helix 2 73..99 CDD:320224 13/25 (52%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 10/28 (36%)
TM helix 6 249..279 CDD:320224 15/29 (52%)
TM helix 7 292..317 CDD:320224 11/24 (46%)
Oprl1NP_001305876.1 7tmA_NOFQ_opioid_R 49..327 CDD:320220 109/294 (37%)
TM helix 1 50..76 CDD:320220 12/29 (41%)
TM helix 2 83..109 CDD:320220 14/26 (54%)
TM helix 3 120..150 CDD:320220 11/29 (38%)
TM helix 4 162..184 CDD:320220 7/21 (33%)
TM helix 5 209..238 CDD:320220 11/29 (38%)
TM helix 6 253..283 CDD:320220 15/29 (52%)
TM helix 7 295..320 CDD:320220 11/24 (46%)

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