DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Cckbr

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_037297.2 Gene:Cckbr / 25706 RGDID:2290 Length:452 Species:Rattus norvegicus


Alignment Length:448 Identity:98/448 - (21%)
Similarity:174/448 - (38%) Gaps:128/448 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNN 67
            |::...|:|....|    |....|.|..:||..||       :.||.:....||:|:|:|:..:.
  Rat    30 NSSSAGNLSCEPPR----IRGTGTRELEMAIRITL-------YAVIFLMSVGGNVLIIVVLGLSR 83

  Fly    68 NMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            .:|:.||..:::||.:||:..:.|:|||....::..:.:|...|:::.||:.|:...|...||.:
  Rat    84 RLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGTVICKAISYLMGVSVSVSTLNLVAI 148

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIV--VLVVSVPVAFTHDVVVDYDAKKNITYGMCT 195
            :::|:.|:..|:::|:.:|.:.....|:..|::  :|:|..||                      
  Rat   149 ALERYSAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYPV---------------------- 191

  Fly   196 FTTNDFLGPR---------------TYQVTFFISSYLLPLMIIS---GLYMRMI----------- 231
            :|....:|||               |:.|...:..:.:|.::|:   ||..|.:           
  Rat   192 YTMVQPVGPRVLQCMHRWPSARVQQTWSVLLLLLLFFIPGVVIAVAYGLISRELYLGLHFDGEND 256

  Fly   232 ----MRLWRQG-----------------------------------------------------T 239
                .|...||                                                     .
  Rat   257 SETQSRARNQGGLPGGAAPGPVHQNGGCRPVTSVAGEDSDGCCVQLPRSRLEMTTLTTPTPGPVP 321

  Fly   240 GVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYS 304
            |.|.::.....:|||.|:::|:|:.|...||||..:...::.|..................|:|.
  Rat   322 GPRPNQAKLLAKKRVVRMLLVIVLLFFLCWLPVYSVNTWRAFDGPGAQRALSGAPISFIHLLSYV 386

  Fly   305 SSCINPLLYAFLSENFRKA-FYKAVNC-----SSRYQNYTSDLPP-PRKTSCARTSTT 355
            |:|:|||:|.|:...||:| ......|     .:|.|....:.|| |...|.:|.|.|
  Rat   387 SACVNPLVYCFMHRRFRQACLDTCARCCPRPPRARPQPLPDEDPPTPSIASLSRLSYT 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 77/373 (21%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 9/29 (31%)
TM helix 4 153..173 CDD:320224 4/21 (19%)
TM helix 5 204..233 CDD:320224 9/61 (15%)
TM helix 6 249..279 CDD:320224 11/29 (38%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
CckbrNP_037297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
7tm_GPCRs 55..406 CDD:475119 80/379 (21%)
TM helix 1 57..81 CDD:410628 9/30 (30%)
TM helix 2 90..112 CDD:410628 8/21 (38%)
TM helix 3 128..150 CDD:410628 6/21 (29%)
TM helix 4 173..189 CDD:410628 4/15 (27%)
TM helix 5 216..239 CDD:410628 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..286 3/28 (11%)
TM helix 6 337..359 CDD:410628 8/21 (38%)
TM helix 7 374..399 CDD:410628 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..452 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.

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