DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and Sstr5

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_037014.2 Gene:Sstr5 / 25354 RGDID:3765 Length:362 Species:Rattus norvegicus


Alignment Length:366 Identity:117/366 - (31%)
Similarity:190/366 - (51%) Gaps:32/366 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEWLAINGTLPW-----IVGFFFGVIAITGFFGNLLVI 60
            ||..::.:..|.||:.....      :..|..:....|.     :|...:.::...|..||.|||
  Rat     1 MEPLSLASTPSWNASAASSG------NHNWSLVGSASPMGARAVLVPVLYLLVCTVGLSGNTLVI 59

  Fly    61 LVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFAS 125
            .||:.:..|::.||:.|:|||.||::| :|.:||.||...|.|||:|.|.||.|..|..:..|.|
  Rat    60 YVVLRHAKMKTVTNVYILNLAVADVLF-MLGLPFLATQNAVSYWPFGSFLCRLVMTLDGINQFTS 123

  Fly   126 IYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNIT 190
            |:.|::||:||:||||||:||...|...:..:|...:|:..|::|:|:....||        ...
  Rat   124 IFCLMVMSVDRYLAVVHPLRSARWRRPRVAKMASAAVWVFSLLMSLPLLVFADV--------QEG 180

  Fly   191 YGMCTFTTNDFLGPRTYQVTFFISSYLL----PLMIISGLYMRMIMRLWRQGTGVRM-SKESQRG 250
            :|.|..:..:.:|  .:...|...:.:|    ||::|...|:.:::::  :..|:|: |...:|.
  Rat   181 WGTCNLSWPEPVG--LWGAAFITYTSVLGFFGPLLVICLCYLLIVVKV--KAAGMRVGSSRRRRS 241

  Fly   251 RKRVTRLVVVVVIAFASLWLPVQLILLLK-SLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYA 314
            .::|||:|||||:.|...|||..::.::. :..:.|..|...|...|.  .|:|::||.|||||.
  Rat   242 ERKVTRMVVVVVLVFVGCWLPFFIVNIVNLAFTLPEEPTSAGLYFFVV--VLSYANSCANPLLYG 304

  Fly   315 FLSENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCARTSTT 355
            |||:|||::|.|.:.....|....:|...||.....|...|
  Rat   305 FLSDNFRQSFRKVLCLRRGYGMEDADAIEPRPDKSGRPQAT 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 102/295 (35%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 14/25 (56%)
TM helix 3 111..141 CDD:320224 14/29 (48%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 6/32 (19%)
TM helix 6 249..279 CDD:320224 13/29 (45%)
TM helix 7 292..317 CDD:320224 12/24 (50%)
Sstr5NP_037014.2 7tm_GPCRs 48..314 CDD:475119 101/280 (36%)
TM helix 2 73..94 CDD:410628 11/21 (52%)
TM helix 3 110..132 CDD:410628 8/21 (38%)
TM helix 4 155..171 CDD:410628 4/15 (27%)
TM helix 5 197..220 CDD:410628 5/22 (23%)
TM helix 6 246..268 CDD:410628 11/21 (52%)
TM helix 7 282..307 CDD:410628 12/26 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..362 5/16 (31%)

Return to query results.
Submit another query.