DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Tacr2

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_542946.1 Gene:Tacr2 / 25007 RGDID:3812 Length:390 Species:Rattus norvegicus


Alignment Length:348 Identity:105/348 - (30%)
Similarity:166/348 - (47%) Gaps:48/348 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFF-FGVIAITGFFGNLLVILVVV 64
            :.:..:|:.:..|||    .:|:|......||:     |...:. ..::|:|   ||..||.:::
  Rat     7 VSDANILSGLESNAT----GVTAFSMPGWQLAL-----WATAYLALVLVAVT---GNATVIWIIL 59

  Fly    65 FNNNMRSTTNLMIVNLAAADLMFVILCI-PFTATDYMVY----YWPYGRFWCRSVQYLIVVTA-F 123
            .:..||:.||..|:|||.||     ||: .|.||...:|    .|.:||.:| ..|.|..:|| |
  Rat    60 AHERMRTVTNYFIINLALAD-----LCMAAFNATFNFIYASHNIWYFGRAFC-YFQNLFPITAMF 118

  Fly   124 ASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKN 188
            .|||::..::.||::|:|||.:.|:.......:||  .:|:|.|.::.|..|...:.||..|.| 
  Rat   119 VSIYSMTAIAADRYMAIVHPFQPRLSAPSTKAIIA--GIWLVALALASPQCFYSTITVDEGATK- 180

  Fly   189 ITYGMCTFT-TNDFLGPR--TYQVTFFISSYLLPLMIISGLYMRMIMRLWR------QGTGVRMS 244
                 |... .||..|..  .|.:..|:..|.|||:::.|.|..:.:.||:      |..|..: 
  Rat   181 -----CVVAWPNDNGGKMLLLYHLVVFVLIYFLPLLVMFGAYSVIGLTLWKRAVPRHQAHGANL- 239

  Fly   245 KESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQT--LAYSSSC 307
             ...:.:|:..:.:|:||:.||..|||..|..:|.:..  |.....|.:.||....  ||.||:.
  Rat   240 -RHLQAKKKFVKAMVLVVLTFAICWLPYHLYFILGTFQ--EDIYYHKFIQQVYLALFWLAMSSTM 301

  Fly   308 INPLLYAFLSENFRKAFYKAVNC 330
            .||::|..|:..||..|..|..|
  Rat   302 YNPIIYCCLNHRFRSGFRLAFRC 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 94/302 (31%)
TM helix 1 40..66 CDD:320224 6/26 (23%)
TM helix 2 73..99 CDD:320224 13/26 (50%)
TM helix 3 111..141 CDD:320224 12/30 (40%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 8/30 (27%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 9/26 (35%)
Tacr2NP_542946.1 7tmA_SKR_NK2R 34..318 CDD:320670 95/309 (31%)
TM helix 1 35..61 CDD:320670 7/33 (21%)
TM helix 2 68..94 CDD:320670 13/30 (43%)
TM helix 3 106..136 CDD:320670 12/30 (40%)
TM helix 4 147..168 CDD:320670 6/22 (27%)
TM helix 5 194..223 CDD:320670 8/28 (29%)
TM helix 6 243..273 CDD:320670 10/29 (34%)
TM helix 7 286..311 CDD:320670 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..390
Blue background indicates that the domain is not in the aligned region.

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