DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Grpr

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_036838.2 Gene:Grpr / 24938 RGDID:2750 Length:384 Species:Rattus norvegicus


Alignment Length:351 Identity:92/351 - (26%)
Similarity:176/351 - (50%) Gaps:22/351 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTT 73
            |.:.|.|.|...:.::|        :..:.:::...:|:|.:.|..||:.:|.:.....:||:..
  Rat    20 NNTFNQTLNPPKMDNWF--------HPGIIYVIPAVYGLIIVIGLIGNITLIKIFCTVKSMRNVP 76

  Fly    74 NLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFL 138
            ||.|.:||..||:.::.|.|..|:.|:...|.:||..|:.:.::.:.:...|::||..:|.||:.
  Rat    77 NLFISSLALGDLLLLVTCAPVDASKYLADRWLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRYK 141

  Fly   139 AVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCT-FTTNDFL 202
            |:|.|:..:.........:....:|||.:::::|.|...|:...:....|.|:..|. :..::.|
  Rat   142 AIVRPMDIQASHALMKICLKAALIWIVSMLLAIPEAVFSDLHPFHVKDTNQTFISCAPYPHSNEL 206

  Fly   203 GPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRMS-----KESQRGRKRVTRLVVVVV 262
            .|:.:.:..|:..|::||.|||..|..:...|.:....:.:.     |:....|||:.:.|:|.|
  Rat   207 HPKIHSMASFLVFYIIPLSIISVYYYFIARNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFV 271

  Fly   263 IAFASLWLPVQLILLLKSLDVIETNT-LTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYK 326
            ..||..|||..:|.|.:|....|.:| :...:..:.|:.||:::||:||.....||::|||.|..
  Rat   272 GLFAFCWLPNHVIYLYRSYHYSEVDTSMLHFITSICARLLAFTNSCVNPFALYLLSKSFRKQFNT 336

  Fly   327 AVNC---SSRYQNYTSDLPPPRKTSC 349
            .:.|   |...:::::.    |.|:|
  Rat   337 QLLCCQPSLLNRSHSTG----RSTTC 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/291 (28%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 9/28 (32%)
TM helix 6 249..279 CDD:320224 13/29 (45%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
GrprNP_036838.2 7tmA_GRPR 42..334 CDD:320252 81/291 (28%)
TM helix 1 43..69 CDD:320252 6/25 (24%)
TM helix 2 76..102 CDD:320252 10/25 (40%)
TM helix 3 114..144 CDD:320252 8/29 (28%)
TM helix 4 156..176 CDD:320252 3/19 (16%)
TM helix 5 208..233 CDD:320252 9/24 (38%)
TM helix 6 258..288 CDD:320252 13/29 (45%)
TM helix 7 302..327 CDD:320252 7/24 (29%)

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