DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Cckar

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_036820.1 Gene:Cckar / 24889 RGDID:2289 Length:444 Species:Rattus norvegicus


Alignment Length:430 Identity:94/430 - (21%)
Similarity:178/430 - (41%) Gaps:105/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ANISLNATRNEENITSFFTDE-----EWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNN 67
            :||:.......||.|.|..|:     ||.:....|      .:.:|.:....||.|||.|::.|.
  Rat    27 SNITPPCELGLENETLFCLDQPQPSKEWQSALQIL------LYSIIFLLSVLGNTLVITVLIRNK 85

  Fly    68 NMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            .||:.||:.:::||.:|||..:.|:||.....::..:.:|...|::..|.:..:...|.:.||.:
  Rat    86 RMRTVTNIFLLSLAVSDLMLCLFCMPFNLIPNLLKDFIFGSAVCKTTTYFMGTSVSVSTFNLVAI 150

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFT 197
            |::|:.|:..|::||:.:|::..|..|...|.:...:..|... :..:|.:....|.|..||.|.
  Rat   151 SLERYGAICRPLQSRVWQTKSHALKVIAATWCLSFTIMTPYPI-YSNLVPFTKNNNQTANMCRFL 214

  Fly   198 TNDFLGPRTYQVTFFISSYLLP--LMIIS------------------------------------ 224
            .......:::|....:..:|||  :|:::                                    
  Rat   215 LPSDAMQQSWQTFLLLILFLLPGIVMVVAYGLISLELYQGIKFDASQKKSAKEKKPSTGSSTRYE 279

  Fly   225 ---GLYM-------RMIMRLWRQGTG------VRMSKESQR--GRKRVTRLVVVVVIAFASLWLP 271
               |.|:       ::.::....|:|      :|.|..:..  .:|||.|:::|:|:.|...|:|
  Rat   280 DSDGCYLQKSRPPRKLELQQLSSGSGGSRLNRIRSSSSAANLIAKKRVIRMLIVIVVLFFLCWMP 344

  Fly   272 VQLILLLKSLDVIE-----TNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCS 331
            :......::.|.:.     :.|....::     .|:|:|||:||::|.|:::.||..|.....|.
  Rat   345 IFSANAWRAYDTVSAEKHLSGTPISFIL-----LLSYTSSCVNPIIYCFMNKRFRLGFMATFPCC 404

  Fly   332 -------------------------SR--YQNYTSDLPPP 344
                                     ||  |.:.::..|||
  Rat   405 PNPGPPGVRGEVGEEEDGRTIRALLSRYSYSHMSTSAPPP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 76/345 (22%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 7/76 (9%)
TM helix 6 249..279 CDD:320224 9/31 (29%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
CckarNP_036820.1 CholecysA-Rec_N 16..62 CDD:462713 10/40 (25%)
7tm_GPCRs 57..397 CDD:475119 77/351 (22%)
TM helix 1 59..83 CDD:410628 8/29 (28%)
TM helix 2 92..114 CDD:410628 9/21 (43%)
TM helix 3 130..152 CDD:410628 4/21 (19%)
TM helix 4 175..191 CDD:410628 2/15 (13%)
TM helix 5 222..245 CDD:410628 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..288 2/24 (8%)
TM helix 6 328..350 CDD:410628 6/21 (29%)
TM helix 7 365..390 CDD:410628 10/29 (34%)

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