DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Prlhr

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_631932.4 Gene:Prlhr / 246075 RGDID:71037 Length:370 Species:Rattus norvegicus


Alignment Length:356 Identity:100/356 - (28%)
Similarity:181/356 - (50%) Gaps:42/356 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ANISLNATRNEENIT----SFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNN 68
            ||.|..|:.:..:.|    :..|..:.|.:...|..::...:.::.:.|..||.|::||:.....
  Rat    26 ANQSAEASESNVSATVPRAAAVTPFQSLQLVHQLKGLIVMLYSIVVVVGLVGNCLLVLVIARVRR 90

  Fly    69 MRSTTNLMIVNLAAADLMFVILCIPFT-ATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            :.:.||.:|.|||.:|::....|:|.| |..:....|.:|...|..|.:|..||.:.|::||..:
  Rat    91 LHNVTNFLIGNLALSDVLMCAACVPLTLAYAFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTI 155

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVD---YDAKKNITYGMC 194
            ::||::.:|||:|.|:  :..::..|::.:|.:..|:::|.| .|...|:   :|.:      :|
  Rat   156 AVDRYVVLVHPLRRRI--SLKLSAYAVLGIWALSAVLALPAA-VHTYHVELKPHDVR------LC 211

  Fly   195 TFTTNDFLGPRTYQVTFF-----ISSYLLPLMIISGLYMRMIMRLWRQ---GTGVRMSKESQRGR 251
                .:|.|.:..|...:     :.:|||||:.|...|:|:.::|..:   |:..:...:..|.|
  Rat   212 ----EEFWGSQERQRQIYAWGLLLGTYLLPLLAILLSYVRVSVKLRNRVVPGSVTQSQADWDRAR 272

  Fly   252 KRVT-RLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAF 315
            :|.| .|:||||:.||..|||:.:..||:.||....:.....::|:....||.||:|.||.:||:
  Rat   273 RRRTFCLLVVVVVVFAVCWLPLHIFNLLRDLDPRAIDPYAFGLVQLLCHWLAMSSACYNPFIYAW 337

  Fly   316 LSENFRKAFYKAVNCSSRYQNYTSDLPPPRK 346
            |.::||:...|.:            |..|||
  Rat   338 LHDSFREELRKML------------LSWPRK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 87/297 (29%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 11/26 (42%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 9/33 (27%)
TM helix 6 249..279 CDD:320224 15/30 (50%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
PrlhrNP_631932.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 4/7 (57%)
7tmA_PrRP_R 61..346 CDD:320516 87/297 (29%)
TM helix 1 62..88 CDD:320516 6/25 (24%)
TM helix 2 95..120 CDD:320516 10/24 (42%)
TM helix 3 134..164 CDD:320516 10/29 (34%)
TM helix 4 175..196 CDD:320516 5/21 (24%)
TM helix 5 222..251 CDD:320516 8/28 (29%)
TM helix 6 271..301 CDD:320516 14/29 (48%)
TM helix 7 314..339 CDD:320516 10/24 (42%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000250 365..370
Blue background indicates that the domain is not in the aligned region.

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