DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and Pgr15l

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001028533.1 Gene:Pgr15l / 245526 MGIID:2676330 Length:456 Species:Mus musculus


Alignment Length:344 Identity:92/344 - (26%)
Similarity:171/344 - (49%) Gaps:37/344 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENTTMLANI---SLN-ATRNEENITSFFTDEEWLAINGTL-PWIVG-----------FFFGVIAI 50
            ||.:.:.:|   |.| .|:|..||:|    .||....|:: .|:.|           |.:.||.:
Mouse    24 ENISWVPSIEDQSCNHTTQNGTNISS----AEWGGPTGSVRRWLGGNPHIMAKIVLTFAYAVIIV 84

  Fly    51 TGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQ 115
            ...|||.||..|.|.:..::.:|.|:|.|||.:|::.::|..||....::...|.:||..|...:
Mouse    85 ISLFGNSLVCQVFVKHKEIKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVFGRIMCHVSR 149

  Fly   116 YLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHD-- 178
            :....:...|..||:.:::||...::||::.|:..::.:.::|::  |.:.:.:::|.|...:  
Mouse   150 FAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQCLFVVAMI--WSIAVFLALPHAIYQNLF 212

  Fly   179 --VVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQG--- 238
              |.:|.|.:   :|.:.:|.....|..:...:..||..|:|||::|...|..:..|||.|.   
Mouse   213 TLVNMDGDTR---SYCLPSFPGPSILVSKYVDLGTFILLYILPLLVIVVTYSHLGKRLWIQNAIG 274

  Fly   239 -TGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLA 302
             ...|......:.||:..|:::::|:.||..|.|:...::|.|...:|.::    |:.......|
Mouse   275 DASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLNFYVVLISSAGVENDS----VLFYAFHWFA 335

  Fly   303 YSSSCINPLLYAFLSENFR 321
            .||:|.||.:|.:|:.:||
Mouse   336 MSSTCYNPFIYCWLNRSFR 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 79/302 (26%)
TM helix 1 40..66 CDD:320224 11/36 (31%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 8/29 (28%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
Pgr15lNP_001028533.1 7tmA_GPR83 73..357 CDD:320511 77/291 (26%)
TM helix 1 74..100 CDD:320511 10/25 (40%)
TM helix 2 107..132 CDD:320511 10/24 (42%)
TM helix 3 145..175 CDD:320511 6/29 (21%)
TM helix 4 186..207 CDD:320511 3/22 (14%)
TM helix 5 237..266 CDD:320511 8/28 (29%)
TM helix 6 286..316 CDD:320511 8/29 (28%)
TM helix 7 325..350 CDD:320511 8/28 (29%)

Return to query results.
Submit another query.