DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and Agtr1a

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_112247.2 Gene:Agtr1a / 24180 RGDID:2070 Length:359 Species:Rattus norvegicus


Alignment Length:325 Identity:92/325 - (28%)
Similarity:166/325 - (51%) Gaps:55/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIP----FTATDYMVYYWP 105
            :.:|.:.|.|||.||::|:.|...:::..::.::|||.|||.| :|.:|    :||   |.|.||
  Rat    35 YSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCF-LLTLPLWAVYTA---MEYRWP 95

  Fly   106 YGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVS 170
            :|...|:.....:....:||::.|..:||||:||:|||::||:.||..:..:..:.:|::..:.|
  Rat    96 FGNHLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLMAGLAS 160

  Fly   171 VPVAFTHDVVVDYDAKKNITYGMCTF---TTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIM 232
            :|.....:|.  :....|||  :|.|   :.|..| |....:|..|..:|.|.:||...|    .
  Rat   161 LPAVIHRNVY--FIENTNIT--VCAFHYESRNSTL-PIGLGLTKNILGFLFPFLIILTSY----T 216

  Fly   233 RLWRQGTGVRMSKESQRGRKR---VTRLVVVVVIAFASLWLPVQLILLL------------KSLD 282
            .:|:   .::.:.|.|:.:.|   :.|:::.:|:.|...|:|.|:...|            |..|
  Rat   217 LIWK---ALKKAYEIQKNKPRNDDIFRIIMAIVLFFFFSWVPHQIFTFLDVLIQLGVIHDCKISD 278

  Fly   283 VIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSDLPPPRKT 347
            :::|      .:.:|. .:||.::|:|||.|.||.:.|:|.|.:.:    :|      :||..|:
  Rat   279 IVDT------AMPITI-CIAYFNNCLNPLFYGFLGKKFKKYFLQLL----KY------IPPKAKS 326

  Fly   348  347
              Rat   327  326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 87/300 (29%)
TM helix 1 40..66 CDD:320224 8/20 (40%)
TM helix 2 73..99 CDD:320224 11/29 (38%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 8/44 (18%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
Agtr1aNP_112247.2 7tmA_AT1R 29..313 CDD:320320 87/300 (29%)
TM helix 1 30..56 CDD:320320 8/20 (40%)
TM helix 2 63..88 CDD:320320 9/25 (36%)
TM helix 3 101..131 CDD:320320 10/29 (34%)
TM helix 4 144..165 CDD:320320 3/20 (15%)
TM helix 5 192..221 CDD:320320 9/35 (26%)
TM helix 6 233..263 CDD:320320 7/29 (24%)
TM helix 7 281..306 CDD:320320 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..359
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.