DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tkr-1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_499064.2 Gene:tkr-1 / 192055 WormBaseID:WBGene00006576 Length:406 Species:Caenorhabditis elegans


Alignment Length:378 Identity:93/378 - (24%)
Similarity:165/378 - (43%) Gaps:52/378 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTTMLANISLNATRNEENIT-------SFF---TDEEWLAINGTLPWIVGFFFGVIAITGFFGNL 57
            |...|..:...|.:|.||:|       .||   :..|.||..    ..|...|.::..|...||.
 Worm     2 NQEFLIQLGERACKNAENLTLPAELEGIFFCAPSSRESLATQ----VFVAIAFVLLMATAIIGNS 62

  Fly    58 LVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY-WPYGRFWCRSVQYLIVVT 121
            :|:.::..:..|....|..:.|:|.|||:..:..:. |:..|.:|| |.||.. |....:..:..
 Worm    63 VVMWIIYQHKVMHYGFNYFLFNMAFADLLIALFNVG-TSWTYNLYYDWWYGDL-CTLTSFFGIAP 125

  Fly   122 AFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVA--------FTHD 178
            ...|:.:::.:|.||..|||:|::.|.:..:. ::|||:.:|:|..|.::|.|        :|:|
 Worm   126 TTVSVCSMMALSWDRCQAVVNPLQKRPLSRKR-SVIAILIIWVVSTVTALPFAIAASVNSLYTYD 189

  Fly   179 VVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIM--RLWRQGTGV 241
            ||....:|.::    |:...|.|     ::...|...|.||::|:...:.|:.:  |...:.|..
 Worm   190 VVTSTVSKAHV----CSAPVNTF-----FEKVLFGIQYALPIIILGSTFTRIAVAFRATNEATDS 245

  Fly   242 RMSKESQRGRKRVTRLVVVVVIAFASLWLPVQL---ILLLKSLDVIETNTLTKLVIQVTAQTLAY 303
            .:.....|.:.:..:::.::|:||...|||..:   ..|.:..|.........|:..:...:.||
 Worm   246 SLKNNHTRAKSKAVKMLFLMVVAFVVCWLPYHIYHAFALEEFFDAARGKYAYLLIYWIAMSSCAY 310

  Fly   304 SSSCINPLLYAFLSENFRKAF------YKAVNCSSRYQNYTSDLPPPRKTSCA 350
                 ||::|.|.:|.||..|      ...::|......| |.|.|.:..|.|
 Worm   311 -----NPIIYCFANERFRIGFRYVFRWIPVIDCKKEQYEY-SQLFPDKMRSMA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 73/298 (24%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 7/25 (28%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 6/19 (32%)
TM helix 5 204..233 CDD:320224 6/30 (20%)
TM helix 6 249..279 CDD:320224 8/32 (25%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
tkr-1NP_499064.2 7tm_GPCRs 44..326 CDD:475119 73/298 (24%)
TM helix 1 46..70 CDD:320512 6/23 (26%)
TM helix 2 79..101 CDD:320512 7/22 (32%)
TM helix 3 116..138 CDD:320512 1/21 (5%)
TM helix 4 160..176 CDD:320512 6/15 (40%)
TM helix 5 207..230 CDD:320512 6/27 (22%)
TM helix 6 259..281 CDD:320512 6/21 (29%)
TM helix 7 294..319 CDD:320512 7/29 (24%)

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