DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and npr-5

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001024265.1 Gene:npr-5 / 190386 WormBaseID:WBGene00021983 Length:433 Species:Caenorhabditis elegans


Alignment Length:388 Identity:86/388 - (22%)
Similarity:167/388 - (43%) Gaps:51/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEWLAING----TLPW----IVGFFFGVIAITGFFGNL 57
            :..||..:.|| |...:..|..|.....|.:|..|    |:.:    |..|.:|.:.:.|.|||.
 Worm    11 ISTTTTPSTIS-NVITSHSNNGSCIQIAEAIAAQGIDDITVDFYIRSIFTFLYGFLFVLGIFGNG 74

  Fly    58 LVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTA 122
            .|:..|..|..::|..|:.::||...||:.|...||.|....|...|.:|...|..|......:.
 Worm    75 GVLWAVARNKRLQSARNVFLLNLIFTDLILVFTAIPVTPWYAMTKDWAFGSVMCHLVPLSNSCSV 139

  Fly   123 FASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVP--VAFTHDVVVDYDA 185
            |.:.::|..:|:|:||.:..|.:..:...:.:.:..::  |||..::::|  ::|.|     .|.
 Worm   140 FVTSWSLTAISLDKFLHINDPTKQPVSIRQALAITFLI--WIVSTLINLPYLMSFEH-----VDG 197

  Fly   186 KKNITYGMCTF-----------TTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWR--- 236
            ...:..|...:           :.|   ..:.|..|..:..:::|:.:|:..|.:::.::.:   
 Worm   198 SFYVQPGETPYCGHFCDEANWQSEN---SRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMI 259

  Fly   237 -------QGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTK--L 292
                   |....:...::...:|:|..:::.:|:.|...|||:.|:.|:|.... |...|.:  .
 Worm   260 IQNAQFCQSLTQKQRSDATSRKKKVNYILIAMVVTFIGCWLPLTLLNLVKDFKK-EPEWLKRQPF 323

  Fly   293 VIQVTAQTLAYSSSCINPLLYAFLS-ENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCARTST 354
            ...:.|..:|.|....||||:.:|: :..|....|.:|.:....::.|     |.::..|.||
 Worm   324 FWAINAHVIAMSLVVWNPLLFFWLTRKQKRSGLSKILNSTEIVSSFAS-----RVSNSIRRST 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 68/314 (22%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 9/25 (36%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 4/21 (19%)
TM helix 5 204..233 CDD:320224 5/28 (18%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
npr-5NP_001024265.1 7tmA_NPYR-like 56..347 CDD:320331 66/301 (22%)
TM helix 1 57..83 CDD:320331 9/25 (36%)
TM helix 2 90..115 CDD:320331 9/24 (38%)
TM helix 3 128..158 CDD:320331 8/29 (28%)
TM helix 4 169..190 CDD:320331 4/22 (18%)
TM helix 5 224..253 CDD:320331 5/28 (18%)
TM helix 6 279..309 CDD:320331 9/29 (31%)
TM helix 7 323..347 CDD:320331 7/23 (30%)

Return to query results.
Submit another query.