DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ckr-1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_491918.3 Gene:ckr-1 / 188774 WormBaseID:WBGene00020712 Length:421 Species:Caenorhabditis elegans


Alignment Length:405 Identity:98/405 - (24%)
Similarity:155/405 - (38%) Gaps:114/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVV-FNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            ::...|.:..|....||.:|||.:: .::..||.||..::|||.|||:..|:|||.|....:...
 Worm    15 MISSIFLLCLILSLLGNAIVILTILGKSHRSRSITNFYLLNLAFADLLRSIICIPSTLLGELTQC 79

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |..|...|:.|.:|..|...||.|||.:::|:|:.|:..|:.||..:|:...||.|..:|.....
 Worm    80 WLLGAAMCKIVAFLQPVGVCASAYTLAVIAIERYYAICRPLESRKWQTKKRALITISLVWCFSFS 144

  Fly   169 VSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRT---YQVTFFISSYLLPLMIISGLYMRM 230
            .::...|.      |||...      .||.:...||..   ||:....:...:||.::.|||..:
 Worm   145 ANLTSLFL------YDANPG------KFTCDSTKGPLVDFIYQLYLTFTLLFVPLALMVGLYGNV 197

  Fly   231 IMRL----------------------------W------------------------------RQ 237
            |:.|                            |                              ..
 Worm   198 IITLNTAINSDHPTVEQQMIEKTLPSRASFSDWFVSAVQRVPSMKVVSKTFQFKEKNSLSIPQTS 262

  Fly   238 GTGVRMSKES-------QRG-------------------RKRVTRLVVVVVIAFASLWLPVQLIL 276
            |..||.|:.|       .||                   :|:|||:::.:||.||..|:|..|..
 Worm   263 GLSVRPSRSSFSSFFSTPRGSFDVTMLLRSTNQEKILIAKKKVTRMLITLVIVFAFCWVPSYLYW 327

  Fly   277 LLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSDL 341
            ||..:..:....|....:..:...:.|.||..||:.|.|::::||.:.  ...|.          
 Worm   328 LLLRMAELAATDLWNPGLNSSLTIMTYISSLANPITYCFMNKSFRSSV--LAYCR---------- 380

  Fly   342 PPPRK--TSCARTST 354
            |.|::  |.|:...|
 Worm   381 PKPKRPLTRCSALPT 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 92/371 (25%)
TM helix 1 40..66 CDD:320224 7/26 (27%)
TM helix 2 73..99 CDD:320224 13/25 (52%)
TM helix 3 111..141 CDD:320224 12/29 (41%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 9/31 (29%)
TM helix 6 249..279 CDD:320224 14/48 (29%)
TM helix 7 292..317 CDD:320224 7/24 (29%)
ckr-1NP_491918.3 7tmA_CCKR-like 30..375 CDD:320124 90/356 (25%)
TM helix 2 49..75 CDD:320124 13/25 (52%)
TM helix 3 87..117 CDD:320124 12/29 (41%)
TM helix 4 131..149 CDD:320124 4/17 (24%)
TM helix 5 171..196 CDD:320124 7/24 (29%)
TM helix 6 300..330 CDD:320124 12/29 (41%)
TM helix 7 343..368 CDD:320124 7/24 (29%)

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