DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-20

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_495888.3 Gene:npr-20 / 188226 WormBaseID:WBGene00011578 Length:410 Species:Caenorhabditis elegans


Alignment Length:423 Identity:108/423 - (25%)
Similarity:175/423 - (41%) Gaps:110/423 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVF 65
            |.|.|.  .|..|||.:::..:..|.|:.::.|.      |...:.::.:....||.|.::|:..
 Worm     1 MLNDTF--RIISNATLDDDPCSVSFIDQPFVKIP------VMIIYCLVFVVCLSGNFLTLIVMTS 57

  Fly    66 NNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY-------WPYGRFWCRSVQYLIVVTAF 123
            :..||:.||..:.|||.|||:..|.||    ...|::.       ||.|...|:....|..:...
 Worm    58 HPMMRTPTNFFLSNLAIADLLVAIFCI----LQNMIHIVGFDHGNWPLGPVMCKLYLGLTNIMPC 118

  Fly   124 ASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKN 188
            .|...|||:|:::::||:||:....:.|.....:|.:.:|::.::|:.|. |.:        .:|
 Worm   119 TSAGILVLVSLEKYIAVLHPLSGLKLLTPEHRWVATMIVWVISILVNFPY-FLY--------AQN 174

  Fly   189 ITY---GMCTFTTNDFLGPRTYQVTF-FISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQ- 248
            .||   ..|      |.|......:| ||..||:||..:..:|.|:...||...:..:.|::|. 
 Worm   175 YTYLGVSAC------FRGSMPIWNSFSFIVWYLIPLTALVFIYSRISHLLWTSDSNRQSSRQSHE 233

  Fly   249 -------------------------------------------------------RGRKRVTRLV 258
                                                                   .||::|.||:
 Worm   234 SNGSLERGNGYANTAQPGSSWQMKNGRIVVYKQESLLNVPKREKKVKEPKRPKDTEGRRKVVRLL 298

  Fly   259 VVVVIAFASLWLPVQLILLLKSLDVIETNTLTK----LVIQVTAQTLAYSSSCINPLLYAFLSEN 319
            |.||::||.|..|....||..|   .:|.|:..    ::.|..:....:.||.|||:|||.||:.
 Worm   299 VAVVVSFALLTFPHHARLLYTS---FQTGTICNSNWTMIFQPLSYIFLFISSAINPILYACLSKR 360

  Fly   320 FRKAFYKAVNCS-------SRYQNYT--SDLPP 343
            ||.|....::|.       ||.:|.|  ||:||
 Worm   361 FRNALSDVIHCRKGVFSRISRSRNRTLVSDVPP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 88/355 (25%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 9/29 (31%)
TM helix 6 249..279 CDD:320224 14/29 (48%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
npr-20NP_495888.3 7tmA_Trissin_R 32..365 CDD:320140 88/360 (24%)
TM helix 1 32..58 CDD:320140 5/31 (16%)
TM helix 2 65..90 CDD:320140 12/28 (43%)
TM helix 3 106..136 CDD:320140 8/29 (28%)
TM helix 4 149..170 CDD:320140 4/21 (19%)
TM helix 5 188..217 CDD:320140 9/28 (32%)
TM helix 6 289..319 CDD:320140 14/29 (48%)
TM helix 7 333..358 CDD:320140 9/24 (38%)

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