DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-24

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_510833.3 Gene:npr-24 / 187897 WormBaseID:WBGene00020086 Length:373 Species:Caenorhabditis elegans


Alignment Length:377 Identity:102/377 - (27%)
Similarity:169/377 - (44%) Gaps:67/377 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLM 76
            :|.| ||:|.|......:.:|   .|.|.      :.|:.|...||.|:..:|:..:||:.:|:.
 Worm     2 MNNT-NEQNFTEVIDPIKTVA---HLTWC------LTALIGIPANLFVLAAIVYFRDMRTISNIY 56

  Fly    77 IVNLAAADLMFVILC-IP---FTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRF 137
            |.|||.|||:|  || ||   |..:.:..:.|  |...|:.......|:.|||...:.::|.||:
 Worm    57 IFNLAVADLLF--LCGIPVSLFAQSSHDGWIW--GPIMCKLYISGNAVSQFASAVFIAILSFDRY 117

  Fly   138 LAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMC-TFTTN-- 199
            |||..||:|:..||........|..||:|::...|: |....::...:......|.| .|..|  
 Worm   118 LAVCRPIQSKSFRTTQAAFALSVAAWIMVILEMTPL-FLFVKLIKSSSAGEARGGSCMLFVGNVT 181

  Fly   200 ------------------DFLGPRTYQVTF-FISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSK 245
                              :.|..|.:.::: |..|||:||:.:...|.::|:::.::..  :|..
 Worm   182 VLESATEMNETLLNEIEQNMLASRRFFISYTFALSYLIPLVAVWYFYFKIILKMCQRKR--QMQT 244

  Fly   246 ESQRGRKRVTRLVVV---VVIAFASLWLPVQLILLLKSLDVIETNTLTK---LVIQVT--AQTLA 302
            :....:||.|::.::   :||::...|||..::..     .||.|...|   |:...|  |..|.
 Worm   245 KRTATKKRTTKVTIMGLAIVISYTHCWLPFWIVQW-----SIEANLFEKSKYLLFCCTHFAFALQ 304

  Fly   303 YSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCARTST 354
            |.:|..||.||.|||::|:|...|.:..:.           |.|....:.||
 Worm   305 YINSAANPFLYVFLSDSFQKNIQKLLRTAK-----------PDKQIMLKNST 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 41/120 (34%)
7tm_1 55..313 CDD:278431 79/291 (27%)
npr-24NP_510833.3 7tm_GPCRs 25..326 CDD:391938 89/318 (28%)
TM helix 1 25..46 CDD:341315 7/26 (27%)
TM helix 2 53..80 CDD:341315 14/28 (50%)
TM helix 3 91..121 CDD:341315 10/29 (34%)
TM helix 4 133..155 CDD:341315 5/22 (23%)
TM helix 5 185..234 CDD:341315 10/48 (21%)
TM helix 6 251..281 CDD:341315 8/34 (24%)
TM helix 7 293..319 CDD:341315 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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