DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-27

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_501164.2 Gene:npr-27 / 185662 WormBaseID:WBGene00018344 Length:366 Species:Caenorhabditis elegans


Alignment Length:333 Identity:67/333 - (20%)
Similarity:144/333 - (43%) Gaps:40/333 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRS----------TTNLMIVNLAAADLMFVILCIPFTATDYMV 101
            |:.:.|..|||.:| ..:|...:.|          .:.:.|..||.:| ||::|.:|.||:....
 Worm    41 VVCLVGTPGNLWII-YKLFRAKLWSGASVQLTVSQRSRIYIFALACSD-MFLLLTLPATASYNYH 103

  Fly   102 YYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVV 166
            ..|.:|...|..::.:.:.....|:..|.:||::|::.|...:|.......::..:|:.|::.|:
 Worm   104 GTWIFGSAACYIIRSIEIFAKLFSVVLLTVMSLERYIIVCTRLRHIYRAWMSLVPLAVGTIFGVL 168

  Fly   167 LVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMI 231
            :...:...:.....|.:|  .::|:......:|:..  ..:....|:..:::|..|::..|:.::
 Worm   169 VPTIIHYFYLQHFSVPFD--PDVTWVCLPLMSNEVF--NLFAQYTFVVGFIIPFAIMTACYIMLV 229

  Fly   232 ------MRLWRQGTGVRMSKESQRGR------KRVTRLVVVVVIAFASLW----LP---VQLILL 277
                  .::.|..|...::|..:..|      |.:.|:.|...:.:|..|    ||   .|:...
 Worm   230 RHVRTKYKMRRAQTTTTLAKPGKEPRYMSEVKKSIWRIAVFHFVCWAPFWGFTMLPNYIYQIDQF 294

  Fly   278 LKSLDVIET--NTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSD 340
            |...:..|:  .::..:..::.:..|.|.::..|.:|||.|:.:.||..|   |...:.:.:|..
 Worm   295 LHGDNEEESGGESIFLVYCRLVSNCLPYINAAGNWVLYALLNVDVRKHIY---NQPKKKRKFTLK 356

  Fly   341 LPPPRKTS 348
            ..|...:|
 Worm   357 FNPVNTSS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 62/307 (20%)
TM helix 1 40..66 CDD:320224 6/18 (33%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 4/34 (12%)
TM helix 6 249..279 CDD:320224 9/42 (21%)
TM helix 7 292..317 CDD:320224 6/24 (25%)
npr-27NP_501164.2 7tm_classA_rhodopsin-like 35..336 CDD:410626 59/300 (20%)
TM helix 1 35..60 CDD:410626 7/19 (37%)
TM helix 2 76..101 CDD:410626 10/25 (40%)
TM helix 3 113..143 CDD:410626 6/29 (21%)
TM helix 4 159..177 CDD:410626 3/17 (18%)
TM helix 5 202..227 CDD:410626 4/26 (15%)
TM helix 6 255..285 CDD:410626 6/29 (21%)
TM helix 7 296..336 CDD:410626 7/39 (18%)

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