DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-6

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_509725.2 Gene:npr-6 / 185623 WormBaseID:WBGene00009619 Length:402 Species:Caenorhabditis elegans


Alignment Length:309 Identity:84/309 - (27%)
Similarity:149/309 - (48%) Gaps:34/309 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVY 102
            |:.:..:..|..:.. .||.||:.||:.|..|::.||:.|.|||.:|:|.....:..|.|...:.
 Worm    38 PFFISMYCAVFLVAS-SGNFLVVYVVMTNKRMQTITNIFITNLAVSDIMVNFTSLWLTPTYTSIG 101

  Fly   103 YWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVH-----PIRSRM-MRTENITLIAIVT 161
            :|.:|...|..:......:.|.|.:||..::|||::.:||     .|..|| ||:   .|..||.
 Worm   102 HWIFGGGLCHGLPLFQGTSIFISTWTLTAIAIDRYIVIVHNSSNININDRMSMRS---CLSFIVL 163

  Fly   162 LWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTF--TTNDFLGPR---TYQVTFFISSYLLPLM 221
            :|:..|::..|.|.        :.|.|..:..|.|  .:.|:....   .:.:...|..::||.:
 Worm   164 IWLCSLLLVTPYAI--------NMKLNYIHEPCDFLICSEDWSNAEFRSIFGIVVMILQFILPFV 220

  Fly   222 IISGLYMRMIMRLW-----RQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSL 281
            :|:..|    :::|     ||....|  |...:.:||:.|:::|:|:.||..|.|..|:..|:.|
 Worm   221 LIAISY----IKIWLFLNSRQSMTER--KSDIKRKKRLLRMLIVMVVIFAICWFPFNLLNCLRDL 279

  Fly   282 DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNC 330
            .:..........:.::...::.:::..||:||||::|.||:.|.|.|.|
 Worm   280 KLDNFMRGYFSFVFLSVHLMSMTATAWNPILYAFMNETFREEFAKVVPC 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 79/300 (26%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 5/31 (16%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 6/24 (25%)
npr-6NP_509725.2 7tmA_NPYR-like 39..322 CDD:320331 79/300 (26%)
TM helix 1 39..65 CDD:320331 7/26 (27%)
TM helix 2 72..97 CDD:320331 9/24 (38%)
TM helix 3 110..140 CDD:320331 8/29 (28%)
TM helix 4 156..177 CDD:320331 6/23 (26%)
TM helix 5 203..232 CDD:320331 6/32 (19%)
TM helix 6 247..277 CDD:320331 10/29 (34%)
TM helix 7 290..315 CDD:320331 6/24 (25%)

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