DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-33

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_510612.1 Gene:npr-33 / 185141 WormBaseID:WBGene00009278 Length:399 Species:Caenorhabditis elegans


Alignment Length:408 Identity:95/408 - (23%)
Similarity:176/408 - (43%) Gaps:75/408 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEEN---------ITSFFTDE---EWLAINGTLPWIV-GFFFGVIAITG 52
            :|.||.:.|..|  |.||.:         |:...|..   :..:.:..|.:|| |..|.:|...|
 Worm    11 IEKTTEIVNSVL--TSNESDGVLEQTSTLISVLATQSAPLQCFSCHPKLYFIVFGLVFMIIICAG 73

  Fly    53 FFGNLLVILVVVFNNN-MRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQY 116
            ..||:.::.|::.:.. |.|:.|..::|||.|||..:|.|.|......:...|....|.|..:::
 Worm    74 VIGNIFIVFVILMDRKLMSSSVNQFLLNLAIADLGNLIFCSPDAILVLIDRGWLLPNFACHLLRF 138

  Fly   117 LIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVV 181
            |.....:||:...:.:.::||||:..|:|.:...|:. |:..:..:|.|....:.|. |.:..:|
 Worm   139 LQEYFLYASVLLQMAIGVERFLAICSPMRMQRFSTKT-TISVLAGVWCVAACFASPY-FLYQGIV 201

  Fly   182 DYDAK----KNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVR 242
            .:...    |.|::...|:          ::....|..|.:||:.::.||..|...||.......
 Worm   202 FHKLYFCFWKGISHKTRTY----------FKYCELIVLYAIPLVFLTTLYSIMCRVLWGNEDNHN 256

  Fly   243 MSKESQRG-----RKRVTRLVVVVVIAFASLWLPVQLILLL-KSLD-VIETNTLTKLVIQVTAQT 300
            ::..||:.     |:.|.:::::.::.:...:.|:|::.:| |.|| .::.....:|::.|    
 Worm   257 IANHSQQEAILKLRRSVVKMLIISMLLYFLCYTPIQVLFMLEKILDHSVQLPQWLRLLLNV---- 317

  Fly   301 LAYSSSCINPLLYAFLSENFR----------------------KAFYKAVNCS-------SRYQN 336
            |:..||..||::|.....:||                      |:.|:.|:.|       |.|.:
 Worm   318 LSVMSSSTNPIVYIICCRHFRLRLRDVAAGISSFCCWLLPSFSKSEYECVDESMTAKLSRSPYVS 382

  Fly   337 YTSDLPPPRKTSCARTST 354
            :.|.   .|:.|.|..||
 Worm   383 FRSS---RRQNSRANLST 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 73/319 (23%)
TM helix 1 40..66 CDD:320224 9/26 (35%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 7/28 (25%)
TM helix 6 249..279 CDD:320224 5/35 (14%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
npr-33NP_510612.1 7tm_classA_rhodopsin-like 62..334 CDD:410626 68/287 (24%)
TM helix 1 62..87 CDD:410626 7/24 (29%)
TM helix 2 94..121 CDD:410626 10/26 (38%)
TM helix 3 133..163 CDD:410626 8/29 (28%)
TM helix 4 175..194 CDD:410626 3/19 (16%)
TM helix 5 218..243 CDD:410626 7/34 (21%)
TM helix 6 268..298 CDD:410626 4/29 (14%)
TM helix 7 309..334 CDD:410626 8/28 (29%)

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