DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and Oprk1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001305664.1 Gene:Oprk1 / 18387 MGIID:97439 Length:409 Species:Mus musculus


Alignment Length:303 Identity:92/303 - (30%)
Similarity:161/303 - (53%) Gaps:26/303 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 INGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTAT 97
            |:..:|.|:...:.|:.:.|..||.||:.|::....|::.||:.|.|||.||.: |...:||.:.
Mouse    54 ISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL-VTTTMPFQSA 117

  Fly    98 DYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTL 162
            .|::..||:|...|:.|..:.....|.||:||.:||:||::||.||:::...||.....|..:.:
Mouse   118 VYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICI 182

  Fly   163 WIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTND--------FLGPRTYQVTFFISSYLLP 219
            |::...|.:...    |:.....::::....|:....|        |:     ::..|:.::::|
Mouse   183 WLLASSVGISAI----VLGGTKVREDVDVIECSLQFPDDEYSWWDLFM-----KICVFVFAFVIP 238

  Fly   220 LMIISGLYMRMIMRLWRQGTGVRM---SKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSL 281
            ::||...|..||:||    ..||:   |:|..|..:|:|:||:|||..|...|.|:.:.:|:::|
Mouse   239 VLIIIVCYTLMILRL----KSVRLLSGSREKDRNLRRITKLVLVVVAVFIICWTPIHIFILVEAL 299

  Fly   282 DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAF 324
            .....:| ..|........|.|::|.:||:|||||.|||::.|
Mouse   300 GSTSHST-AALSSYYFCIALGYTNSSLNPVLYAFLDENFKRCF 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 89/295 (30%)
TM helix 1 40..66 CDD:320224 8/25 (32%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 12/29 (41%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 7/28 (25%)
TM helix 6 249..279 CDD:320224 12/29 (41%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
Oprk1NP_001305664.1 7tmA_Kappa_opioid_R 60..341 CDD:320219 89/295 (30%)
TM helix 1 61..87 CDD:320219 8/25 (32%)
TM helix 2 94..120 CDD:320219 11/26 (42%)
TM helix 3 131..161 CDD:320219 12/29 (41%)
TM helix 4 173..195 CDD:320219 3/25 (12%)
TM helix 5 223..252 CDD:320219 8/33 (24%)
TM helix 6 267..297 CDD:320219 12/29 (41%)
TM helix 7 309..334 CDD:320219 10/24 (42%)

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