DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and npr-10

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001024487.1 Gene:npr-10 / 183747 WormBaseID:WBGene00008278 Length:365 Species:Caenorhabditis elegans


Alignment Length:343 Identity:80/343 - (23%)
Similarity:158/343 - (46%) Gaps:52/343 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVIL---CIPFTATDYMV 101
            |:...:.:|.:.|..|||||::.|:....::|..|:.||:|:.:|:...|:   ..|.||...: 
 Worm    30 ILATIYTIIVVVGVTGNLLVVMSVMRFKVLQSVRNMFIVSLSVSDIFVAIVSGSVTPITAFSKV- 93

  Fly   102 YYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVV 166
              |.:|...|..:..|.......|..||..::|||::.:.||.:..:.:.:.:.:|:..:  .:.
 Worm    94 --WLFGGPLCHLLPLLQGTALSFSTLTLTAIAIDRYILICHPTKEPIRKDQALKMISFNS--AIS 154

  Fly   167 LVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGP-----RTYQVTFFISSYLLPLMIISGL 226
            :.:|||: |....::.:   :|.....|    ::..||     ..|....||..::.||:.|:..
 Worm   155 VGLSVPL-FMKQELMQF---RNYCGEYC----SENWGPDAYLRSVYGTVVFIIQFVFPLITITFC 211

  Fly   227 YMRMIMRLWRQGTGVRMSKE----------SQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSL 281
            |..:.::| |:|..||.|::          :|| |.|..|:::::.:.||..|||......|:..
 Worm   212 YASISIKL-RRGVFVRGSQKELMSEARRQLTQR-RLRTNRMLIIMTVTFALSWLPSVGFNFLRDY 274

  Fly   282 D----VIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVN-----CSSRYQNY 337
            .    :|::.   ..:..:....::.:|..:||.||.:.:|:||.||...::     |..|..: 
 Worm   275 SALPGIIDSQ---DYLFGIIFHCISMTSVIVNPFLYGYCNEHFRAAFAALLDTVKAACGMRRVS- 335

  Fly   338 TSDLPPPRKTSCARTSTT 355
                  |...:|::..:|
 Worm   336 ------PGNPACSQLLST 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 73/305 (24%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 9/28 (32%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 8/33 (24%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 5/24 (21%)
npr-10NP_001024487.1 7tmA_NPYR-like 29..318 CDD:320331 73/305 (24%)
TM helix 1 30..56 CDD:320331 9/25 (36%)
TM helix 2 63..88 CDD:320331 7/24 (29%)
TM helix 3 101..131 CDD:320331 8/29 (28%)
TM helix 4 142..163 CDD:320331 4/23 (17%)
TM helix 5 189..218 CDD:320331 7/28 (25%)
TM helix 6 242..272 CDD:320331 10/30 (33%)
TM helix 7 286..311 CDD:320331 5/24 (21%)

Return to query results.
Submit another query.