DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-3

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_502162.1 Gene:npr-3 / 182494 WormBaseID:WBGene00007006 Length:376 Species:Caenorhabditis elegans


Alignment Length:345 Identity:79/345 - (22%)
Similarity:148/345 - (42%) Gaps:41/345 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYW 104
            |....:.::.:....||.||:.|:.||....|...:.:..||.:||:..:..:|.||.......|
 Worm    27 IFSLLYLLVWVGAIVGNTLVLYVLTFNQVSLSVRTVFVGCLAGSDLLMCLFSLPITAISIFSRVW 91

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            .:...:|:.:......|.|.|.:||.::::||.:.::.| ...::.......| :..:|::...:
 Worm    92 VFPAIFCKLIGVFQGGTIFVSSFTLTVIALDRCVLILRP-NQEIVNFPRAVFI-VFCIWLLGYSL 154

  Fly   170 SVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGP--------RTYQVTFFISSYLLPLMIISGL 226
            ::||....|:.| ||   .|....|.....|| .|        |.|.::..:..:.:|.:|.|..
 Worm   155 ALPVGIYSDIAV-YD---EICGTFCEENWPDF-NPDTGRSGIRRAYGLSVLVLQFGIPALISSIC 214

  Fly   227 YMRMIMRLW------RQGTGVRMSKESQ--RGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDV 283
            |. ||.|:.      |:|..:|...|::  ..:.|..|:::|:|:.|...|:|...:.|.:.|..
 Worm   215 YW-MISRVMSDQLARRRGHNIRPESETKLVNRKTRANRMMIVMVVGFVLAWMPFNAVNLYRDLFG 278

  Fly   284 IETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKA-------------FYKAVNCSSRYQ 335
            |.....|...:   ....|..|:.:||::|::.:..||::             ..|....:|:..
 Worm   279 ISKWYSTVFAL---CHVCAMCSAVLNPIIYSWFNPQFRQSITTLFKGTDEARLIKKKPQSTSKMV 340

  Fly   336 NYTSDLPPPRK-TSCARTST 354
            :|.::....|| |..|.|.|
 Worm   341 SYPTNFSEIRKETEIASTKT 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 70/312 (22%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 7/25 (28%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 9/36 (25%)
TM helix 6 249..279 CDD:320224 8/29 (28%)
TM helix 7 292..317 CDD:320224 5/24 (21%)
npr-3NP_502162.1 7tmA_NPYR-like 26..314 CDD:320331 69/297 (23%)
TM helix 1 27..53 CDD:320331 6/25 (24%)
TM helix 2 60..85 CDD:320331 7/24 (29%)
TM helix 3 98..128 CDD:320331 8/29 (28%)
TM helix 4 139..160 CDD:320331 4/21 (19%)
TM helix 5 192..221 CDD:320331 8/29 (28%)
TM helix 6 244..274 CDD:320331 8/29 (28%)
TM helix 7 284..309 CDD:320331 6/27 (22%)

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