DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and npr-25

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_505883.1 Gene:npr-25 / 179570 WormBaseID:WBGene00011381 Length:376 Species:Caenorhabditis elegans


Alignment Length:369 Identity:81/369 - (21%)
Similarity:154/369 - (41%) Gaps:71/369 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPWIVGFFFGVIAITGFFGNLLVILVVVF-NNNMRST------TNLMIVNLAAADLMFVILCIPF 94
            :|:.:.|.||.:      ||..|:..|.| ..:::|:      |.:.||.|.|.||: |.:.|||
 Worm    25 IPYSICFVFGTL------GNTAVLSYVFFITRSLKSSVTALGNTFIYIVALCAVDLL-VTVSIPF 82

  Fly    95 TATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSR---MMRTENI-T 155
            :.:..::..|.:|...|:....|.:.....|.:.|..::.||::|:.||...|   |..|..| |
 Worm    83 SLSYMILNNWVFGELVCKIHFMLELSNKMCSTFILTALAFDRYMAICHPEIKRIHEMRHTIYITT 147

  Fly   156 LIAIVTLWIV-VLVVSVPVAF-------------THDVVVDYDAKKNITYGMCTFTTNDFLGPRT 206
            ::|.::|::: .:|:|..|..             .|:|:     ::....||.       |..:.
 Worm   148 ILATLSLFLISPVVLSARVTSFKSGQYFVSAKNERHEVI-----RQMCIDGMA-------LEWKV 200

  Fly   207 YQVTFFI-SSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWL 270
            :...|.| .::|||..:::..|.::::||.||.   |...:|:...:|:|...:.....:.|..:
 Worm   201 WVSAFLIFFAFLLPCTLLTYFYAKIVLRLRRQR---RTMLQSRIPLRRITIYTMAATFFYLSCHI 262

  Fly   271 PVQLILLLKSLDVIETNTLTKLVIQVT--AQTLAYSSSCINPLLYAFLSENFRKAFY-------- 325
            |..|..:......:..:.:...|:..|  :..|.:.|:..|.:.||.|:..|:|...        
 Worm   263 PFWLPQIYNIFSTVLGHKMNPKVMTFTYYSHLLPFISAAFNWIFYARLNSQFKKGLVLVTERMIR 327

  Fly   326 -------------KAVNCSSRYQNYTSDLPPPRKTSCARTSTTG 356
                         .||..:|::.:.....|........|:|:.|
 Worm   328 KRTKSMHEKGYSEAAVELTSKFDDVPLMCPHCEAQLSIRSSSNG 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 73/312 (23%)
TM helix 1 40..66 CDD:320224 8/26 (31%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 7/29 (24%)
TM helix 4 153..173 CDD:320224 6/21 (29%)
TM helix 5 204..233 CDD:320224 6/29 (21%)
TM helix 6 249..279 CDD:320224 5/29 (17%)
TM helix 7 292..317 CDD:320224 7/26 (27%)
npr-25NP_505883.1 7tm_classA_rhodopsin-like 24..311 CDD:410626 71/307 (23%)
TM helix 1 24..49 CDD:410626 9/29 (31%)
TM helix 2 62..87 CDD:410626 11/25 (44%)
TM helix 3 99..129 CDD:410626 7/29 (24%)
TM helix 4 141..160 CDD:410626 5/18 (28%)
TM helix 5 199..224 CDD:410626 6/24 (25%)
TM helix 6 244..271 CDD:410626 5/26 (19%)
TM helix 7 286..311 CDD:410626 6/24 (25%)

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