DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and frpr-18

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_504746.1 Gene:frpr-18 / 179076 WormBaseID:WBGene00020586 Length:432 Species:Caenorhabditis elegans


Alignment Length:354 Identity:76/354 - (21%)
Similarity:152/354 - (42%) Gaps:77/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNN-NMRSTT-NLMIVNLAAADLMFVILCIP-------------FTA 96
            ||.:.|.|||.|..  ::|:. :|||:: |:::..|:..|...:.|.||             .:.
 Worm    13 VIVLVGIFGNSLSF--ILFSRPHMRSSSVNVLLCALSFFDFSLLTLSIPIFVIPNLDLWANDLSL 75

  Fly    97 TDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVT 161
            :.||.|.       .:.:..:.::....|:|.:|:::::|::||..|::.|:..|...:..|   
 Worm    76 STYMAYI-------LKLIYPINLMMQTCSVYIMVMITLERWVAVCRPLQVRVWCTPRKSRNA--- 130

  Fly   162 LWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFT--TND-------FLGPRTYQVTFFISSYL 217
              |:|::||   ||.::.|..::.:..:|.....:.  ..|       ::|  .|.:.:.::.:|
 Worm   131 --ILVIIVS---AFLYNFVRFFEYRFVVTESGALYEKWLRDPGKHRWYYVG--YYTILYIVTHFL 188

  Fly   218 LPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASL-WLPVQLILLLKSL 281
            :|..:::.....:|:.:.:.....:|....|:..:..|.::::|...||.. .||   .||..|.
 Worm   189 VPFSVMAFANGHVIVAMCKLSKTRQMLTRQQQREQSTTVMLLIVTFVFAICNTLP---FLLNVSE 250

  Fly   282 DVIET--------------NTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRK--AFYKAVNC 330
            .:..|              |.|:.|::.:.:.|..        ::|...||.:|:  .|.....|
 Worm   251 SIFPTLFQDESTRGLAYWLNDLSNLLVVLNSGTTF--------IIYFTFSEKYRQTLVFILKNGC 307

  Fly   331 S---SRYQNYTSDLPPPRKTSCARTSTTG 356
            .   |.|.|||:   ..|..|...:|.||
 Worm   308 CATVSDYNNYTA---MSRTASMRISSETG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 30/131 (23%)
7tm_1 55..313 CDD:278431 56/296 (19%)
frpr-18NP_504746.1 7tmA_FMRFamide_R-like 6..299 CDD:320109 64/315 (20%)
TM helix 1 6..32 CDD:320109 8/20 (40%)
TM helix 2 39..64 CDD:320109 6/24 (25%)
TM helix 3 83..113 CDD:320109 5/29 (17%)
TM helix 4 125..145 CDD:320109 7/27 (26%)
TM helix 5 175..200 CDD:320109 4/26 (15%)
TM helix 6 220..250 CDD:320109 8/32 (25%)
TM helix 7 267..292 CDD:320109 5/32 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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