DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ckr-2

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001367973.1 Gene:ckr-2 / 175341 WormBaseID:WBGene00021439 Length:603 Species:Caenorhabditis elegans


Alignment Length:550 Identity:106/550 - (19%)
Similarity:189/550 - (34%) Gaps:231/550 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TMLANISLN-ATRNEENITSFFTDEEWLAINGTLP-WIVGFFFGVIAITGFFGNLLVILVVVFNN 67
            |:.:|:|.. :|.::|.|..|         .||.. :.:...|.:|.:....||.:|::|::...
 Worm    34 TLNSNLSTTMSTVHQEEICRF---------RGTTENYTIAVTFFMIFLLSVVGNSVVLIVIIKQR 89

  Fly    68 NMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLM 132
            .|||.||:.::||||:|:|..::|:|.|....::..|.:|.:.|:.:.||..|...||.|||.::
 Worm    90 AMRSITNIYLMNLAASDMMLSVVCMPPTLVSMVMNCWMFGNYMCKILAYLQPVVVTASAYTLAVI 154

  Fly   133 SIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFT 197
            :.:|:.|:..|:.||:.:|.:.....|..:|::.:..::.:.|              .|...|::
 Worm   155 AFERYFAICKPLHSRIWQTRSHAYAMITLVWVIAIAANILMLF--------------MYEQQTYS 205

  Fly   198 TNDF----LGPR----TYQVTFFISSYLLPLMIISGLYMRMIMRL-------------------- 234
            :|.:    :.|.    .|||...:...::||::::|||..:|..|                    
 Worm   206 SNGYTCAPIHPPIYHFAYQVYMTVVLLVIPLVVMAGLYGNVITSLKSGIKLEIASVDPPLATATT 270

  Fly   235 ----------------------------------------------------------------- 234
                                                                             
 Worm   271 TGAKNLGSHSDSAHLLLNNVLVGSSQLARATSCIALNTFSCNNTTNPFSTLTPPPPIQQKNRSKP 335

  Fly   235 -----------------------------------------------WRQ--------------- 237
                                                           |.:               
 Worm   336 QLLQLPGKIDNFEEFRLQCLSDCRSDGVLFPPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKTVQ 400

  Fly   238 --GTGVRMS----------------KESQRGRKRVTRLVVVVVIAFASLWLPVQLILLL------ 278
              ..|.|.|                ::|...::||.::::||||.|...|.|..:..||      
 Worm   401 HPNFGHRKSDTSICLENPSLRSTHTQKSAMAKQRVIKMLIVVVIIFFCCWTPSYIWWLLLIAGDS 465

  Fly   279 -KSLDV----IETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFY----KAVNCSSRY 334
             :||::    .:.||...|        |.|.|||.||:.|.||::.||.|.|    :..|....:
 Worm   466 FQSLNLSVWNSDINTFITL--------LTYISSCTNPITYCFLNKKFRNAVYATFGRKKNMRHHF 522

  Fly   335 Q----------NYTSDLPPPRKTSCARTST 354
            |          |||:...|.:..:.:.:||
 Worm   523 QKVYIPVNGGTNYTNKGEPRQIINRSVSST 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 87/468 (19%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 10/32 (31%)
TM helix 6 249..279 CDD:320224 11/36 (31%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
ckr-2NP_001367973.1 7tmA_CCKR-like 61..508 CDD:320124 87/468 (19%)
TM helix 1 62..88 CDD:320124 6/25 (24%)
TM helix 2 95..121 CDD:320124 11/25 (44%)
TM helix 3 133..163 CDD:320124 11/29 (38%)
TM helix 4 177..195 CDD:320124 2/17 (12%)
TM helix 5 220..245 CDD:320124 8/24 (33%)
TM helix 6 430..460 CDD:320124 10/29 (34%)
TM helix 7 476..501 CDD:320124 12/32 (38%)

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