DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and LOC116412268

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_031761986.1 Gene:LOC116412268 / 116412268 XenbaseID:XB-GENE-29098387 Length:332 Species:Xenopus tropicalis


Alignment Length:212 Identity:48/212 - (22%)
Similarity:75/212 - (35%) Gaps:64/212 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GYSAFEGQFPYHAEVRIKPISLSYVHTCAGSLITLKYVLTTAACL---YRWVNEFGIEYSFVTLG 113
            |...|:|:|                ..|.|.  ..:.:...:.|.   ||||..   :|:|..||
 Frog  1430 GVQLFKGKF----------------FVCQGE--DTRNITNKSDCAEASYRWVRH---KYNFDNLG 1473

  Fly   114 ----SLF-----NG--DTQWEQRINFTDNGIHTHPLYRY-PSYELYNIATIRLDCPATLNRFVQP 166
                |||     :|  |..::   .....|:...|:..: |...||.|:.:.:.....||.||..
 Frog  1474 QALMSLFVLASKDGWVDIMYD---GLDAVGVDQQPIMNHNPWMLLYFISFLLIVAFFVLNMFVGV 1535

  Fly   167 IRLPRLTDMRTY-EMMEGTATGDSFVRGLKYLR---NQVMSNKDCQ---------RDILPGVVIT 218
            : :......|.: |..|.....:..:|.|:..|   .:.|:...|:         |       :.
 Frog  1536 V-VENFHKCRQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFR-------LL 1592

  Fly   219 VQHLCTNS----FIGGV 231
            |.||||:.    ||.||
 Frog  1593 VHHLCTSHYLDLFITGV 1609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 48/212 (23%)
TM helix 1 40..66 CDD:320224 4/13 (31%)
TM helix 2 73..99 CDD:320224 4/28 (14%)
TM helix 3 111..141 CDD:320224 9/40 (23%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 11/41 (27%)
TM helix 6 249..279 CDD:320224
TM helix 7 292..317 CDD:320224
LOC116412268XP_031761986.1 7tm_GPCRs 39..313 CDD:475119
TM helix 1 39..62 CDD:320105
TM helix 2 70..91 CDD:320105
TM helix 3 107..129 CDD:320105
TM helix 4 152..168 CDD:320105
TM helix 5 203..226 CDD:320105
TM helix 6 245..267 CDD:320105
TM helix 7 281..306 CDD:320105
Blue background indicates that the domain is not in the aligned region.

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