DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and LOC110438944

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_021328259.3 Gene:LOC110438944 / 110438944 -ID:- Length:383 Species:Danio rerio


Alignment Length:328 Identity:102/328 - (31%)
Similarity:178/328 - (54%) Gaps:29/328 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRS-TTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            |:...|.:|.:.|..||.||:.|::.|..|.: :|||.|:||..|||.|::.|:|..||.|.:..
Zfish    40 IISLIFSMIFLVGTVGNCLVLAVLIRNGQMNTKSTNLFILNLGLADLCFIVFCVPLQATIYTMDE 104

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |.:|.|.|::|.::|.:|.:|||:||..:|:||:||:.:|:|||..||....|.:|..:|.:.|.
Zfish   105 WVFGAFVCKAVHFIIYLTMYASIFTLAAVSLDRYLAIRYPLRSRETRTPRNALTSISLVWALSLF 169

  Fly   169 VSVP-VAFTHDVVVD--------YDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIIS 224
            .|.| :::...:.:|        :.........:||                ||..||:|::|:.
Zfish   170 FSSPYLSYYQQMDLDGTTVCIPAWSVHHRQAMDICT----------------FIFGYLIPVLILG 218

  Fly   225 GLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTL 289
            ..|.|.|..||.....::...||::.:::||:::::|.:.|...|||..|::|.........|. 
Zfish   219 ITYARTIRYLWTSVDPMQDMSESRKAKRKVTKMIIIVAVLFCLCWLPHHLVILCMWFGHFPLNH- 282

  Fly   290 TKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCS--SRYQNYTSDLPPPRKTSCART 352
            |..|:::.:..:||::||:||::||.:|::|||.|.|...|:  :|..|....:.|.:..|....
Zfish   283 TTYVLRILSHLVAYANSCLNPIVYALVSKHFRKGFKKVFGCAFRNRVVNRIHTVQPAQTVSLMEA 347

  Fly   353 STT 355
            :::
Zfish   348 ASS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 95/293 (32%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 14/25 (56%)
TM helix 3 111..141 CDD:320224 14/29 (48%)
TM helix 4 153..173 CDD:320224 6/20 (30%)
TM helix 5 204..233 CDD:320224 9/28 (32%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
LOC110438944XP_021328259.3 None

Return to query results.
Submit another query.