DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and qrfprb

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_017214090.3 Gene:qrfprb / 101886159 ZFINID:ZDB-GENE-131125-15 Length:433 Species:Danio rerio


Alignment Length:303 Identity:82/303 - (27%)
Similarity:147/303 - (48%) Gaps:18/303 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWC 111
            :|.:....||.||:.|||....:|:.||:.|.:||.:||:....|||||....:...|..|...|
Zfish    62 IIFVLALVGNSLVVYVVVRKRAIRTATNIFICSLAVSDLLITFFCIPFTLLQNISSEWLGGVLVC 126

  Fly   112 RSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFT 176
            ::|.::........|.|:..::|:|:..:|:|::.:...|.......:..:||..::|..|:.|.
Zfish   127 KTVPFVQTTAIVTGILTMTCIAIERYQGIVYPLKMKRQYTPKRAYRMLGLVWIAAVMVGSPMLFV 191

  Fly   177 HDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLW---RQG 238
            ..:.|.||...:..:..|.......|..:.|.....::.:||||..:..||.|:.:.||   |.|
Zfish   192 QQLEVKYDFLYDHHHVCCQERWQSLLQRQLYTTFIMVALFLLPLAAMLFLYSRIGVELWIRKRVG 256

  Fly   239 TGVRMS-------KESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIET--NTLTKLVI 294
            ....:|       .:..|.:||..::::.:|:.|...|.|..::.:|...:.:|.  |.:|..:|
Zfish   257 DASVLSTMNHREISKISRKKKRAVKMMITIVLLFTVCWAPFHIVHMLFEYNDLEKKYNEVTVNMI 321

  Fly   295 QVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNY 337
            ....|.:.:|:|..||::|||::|||:|      :|.|...:|
Zfish   322 IAVVQAIGFSNSFNNPIVYAFMNENFKK------SCLSTLSSY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 79/288 (27%)
TM helix 1 40..66 CDD:320224 8/18 (44%)
TM helix 2 73..99 CDD:320224 12/25 (48%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 7/29 (24%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
qrfprbXP_017214090.3 None

Return to query results.
Submit another query.